COBRA improves the completeness and contiguity of viral genomes assembled from metagenomes
Sign Up to like & getrecommendations! Published in 2024 at "Nature Microbiology"
DOI: 10.1038/s41564-023-01598-2
Abstract: Viruses are often studied using metagenome-assembled sequences, but genome incompleteness hampers comprehensive and accurate analyses. Contig Overlap Based Re-Assembly (COBRA) resolves assembly breakpoints based on the de Bruijn graph and joins contigs. Here we benchmarked… read more here.
Keywords: viral genomes; improves completeness; contiguity; cobra improves ... See more keywords
Determinants of Acute and Late Pulmonary Vein Reconnection in Contact Force–Guided Pulmonary Vein Isolation: Identifying the Weakest Link in the Ablation Chain
Sign Up to like & getrecommendations! Published in 2017 at "Circulation: Arrhythmia and Electrophysiology"
DOI: 10.1161/circep.116.004867
Abstract: Background— Pulmonary vein reconnection (PVR) still determines recurrences of atrial fibrillation after contact force (CF)–guided pulmonary vein isolation. We studied whether acute PVR (adenosine and waiting time) and late PVR (at repeat) are explained by… read more here.
Keywords: vein; ablation; contiguity; vein isolation ... See more keywords
LRScaf: improving draft genomes using long noisy reads
Sign Up to like & getrecommendations! Published in 2019 at "BMC Genomics"
DOI: 10.1186/s12864-019-6337-2
Abstract: BackgroundThe advent of third-generation sequencing (TGS) technologies opens the door to improve genome assembly. Long reads are promising for enhancing the quality of fragmented draft assemblies constructed from next-generation sequencing (NGS) technologies. To date, a… read more here.
Keywords: draft; using long; contiguity; improving draft ... See more keywords