SARS-CoV-2 genomic surveillance identifies naturally occurring truncation of ORF7a that limits immune suppression
Sign Up to like & getrecommendations! Published in 2021 at "Cell Reports"
DOI: 10.1016/j.celrep.2021.109197
Abstract: Over 950,000 whole genome sequences of SARS-CoV-2 have been determined for viruses isolated from around the world. These sequences have been critical for understanding the spread and evolution of SARS-CoV-2. Using global phylogenomics, we show… read more here.
Keywords: genomic surveillance; surveillance identifies; cov genomic; sars cov ... See more keywords
Global landscape of SARS-CoV-2 genomic surveillance and data sharing.
Sign Up to like & getrecommendations! Published in 2022 at "Nature genetics"
DOI: 10.1038/s41588-022-01033-y
Abstract: Genomic surveillance has shaped our understanding of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants. We performed a global landscape analysis on SARS-CoV-2 genomic surveillance and genomic data using a collection of country-specific data. Here,… read more here.
Keywords: sars cov; cov genomic; global landscape; genomic surveillance ... See more keywords
SARS-CoV-2 genomic epidemiology: data and sequencing infrastructure
Sign Up to like & getrecommendations! Published in 2022 at "Future Microbiology"
DOI: 10.2217/fmb-2021-0207
Abstract: Background: Genomic surveillance of SARS-CoV-2 is critical in monitoring viral lineages. Available data reveal a significant gap between low- and middle-income countries and the rest of the world. Methods: The SARS-CoV-2 sequencing costs using the… read more here.
Keywords: epidemiology data; cov genomic; data sequencing; genomic epidemiology ... See more keywords
Sentinel Surveillance System Implementation and Evaluation for SARS-CoV-2 Genomic Data, Washington, USA, 2020–2021
Sign Up to like & getrecommendations! Published in 2023 at "Emerging Infectious Diseases"
DOI: 10.3201/eid2902.221482
Abstract: Genomic data provides useful information for public health practice, particularly when combined with epidemiologic data. However, sampling bias is a concern because inferences from nonrandom data can be misleading. In March 2021, the Washington State… read more here.
Keywords: surveillance; sentinel surveillance; genomic data; cov genomic ... See more keywords
Web Resources for SARS-CoV-2 Genomic Database, Annotation, Analysis and Variant Tracking
Sign Up to like & getrecommendations! Published in 2023 at "Viruses"
DOI: 10.3390/v15051158
Abstract: The SARS-CoV-2 genomic data continue to grow, providing valuable information for researchers and public health officials. Genomic analysis of these data sheds light on the transmission and evolution of the virus. To aid in SARS-CoV-2… read more here.
Keywords: annotation analysis; web resources; analysis variant; cov genomic ... See more keywords