How do properties of data, their curation, and their funding relate to reuse?
Sign Up to like & getrecommendations! Published in 2022 at "Journal of the Association for Information Science and Technology"
DOI: 10.1002/asi.24646
Abstract: Despite large public investments in facilitating the secondary use of data, there is little information about the specific factors that predict data's reuse. Using data download logs from the Inter‐university Consortium for Political and Social… read more here.
Keywords: reuse; data reuse; curation; data curation ... See more keywords
ClinGen Variant Curation Expert Panel experiences and standardized processes for disease and gene‐level specification of the ACMG/AMP guidelines for sequence variant interpretation
Sign Up to like & getrecommendations! Published in 2018 at "Human Mutation"
DOI: 10.1002/humu.23645
Abstract: Genome‐scale sequencing creates vast amounts of genomic data, increasing the challenge of clinical sequence variant interpretation. The demand for high‐quality interpretation requires multiple specialties to join forces to accelerate the interpretation of sequence variant pathogenicity.… read more here.
Keywords: interpretation; sequence variant; curation; clingen ... See more keywords
Supporting open research data practice through data curation and discovery: A global perspective
Sign Up to like & getrecommendations! Published in 2020 at "Proceedings of the Association for Information Science and Technology"
DOI: 10.1002/pra2.291
Abstract: This panel will address the issues associated with the practice and service of open research data curation and discovery from a global perspective. The sub‐fields of information science such as information retrieval, information curation, information… read more here.
Keywords: research; research data; open research; data curation ... See more keywords
Crowd enabled curation and querying of large and noisy text mined protein interaction data
Sign Up to like & getrecommendations! Published in 2017 at "Distributed and Parallel Databases"
DOI: 10.1007/s10619-017-7209-x
Abstract: The abundance of mined, predicted and uncertain biological data warrant massive, efficient and scalable curation efforts. The human expertise required for any successful curation enterprise is often economically prohibitive, especially for speculative end user queries… read more here.
Keywords: protein interaction; mined protein; interaction data; curation ... See more keywords
Nontargeted Analysis of Face Masks: Comparison of Manual Curation to Automated GCxGC Processing Tools.
Sign Up to like & getrecommendations! Published in 2021 at "Journal of the American Society for Mass Spectrometry"
DOI: 10.1021/jasms.0c00318
Abstract: Masks constructed of a variety of materials are in widespread use due to the COVID-19 pandemic, and people are exposed to chemicals inherent in the masks through inhalation. This work aims to survey commonly available… read more here.
Keywords: machine learning; mask; curation; manual curation ... See more keywords
The Art of Scientific Curation
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DOI: 10.1029/2023eo230201
Abstract: Scientific content curation provides users across diverse disciplines and levels of experience with a valuable means of accessing relevant and reliable information amid the growing data landscape. read more here.
Keywords: art scientific; curation; scientific curation;
Trajectory of exonic variant discovery in a large clinical population: implications for variant curation
Sign Up to like & getrecommendations! Published in 2018 at "Genetics in Medicine"
DOI: 10.1038/s41436-018-0353-5
Abstract: PurposePrecision health initiatives and reduced sequencing costs are driving large-scale human genome analyses. Genetic variant curation is a bottleneck in clinical applications. The burden of variant curation can be high for newly discovered variants because… read more here.
Keywords: variant discovery; discovery; rate; curation ... See more keywords
CobraMod: A pathway-centric curation tool for constraint-based metabolic models.
Sign Up to like & getrecommendations! Published in 2022 at "Bioinformatics"
DOI: 10.1093/bioinformatics/btac119
Abstract: SUMMARY COnstraint-Based Reconstruction and Analysis of genome-scale metabolic models has become a widely used tool to understand metabolic network behavior at a large-scale. However, existing reconstruction tools lack functionalities to address modellers' common objective to… read more here.
Keywords: tool; pathway centric; constraint based; metabolic models ... See more keywords
Prediction and curation of missing biomedical identifier mappings with Biomappings
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DOI: 10.1093/bioinformatics/btad130
Abstract: Motivation Biomedical identifier resources (ontologies, taxonomies, controlled vocabularies) commonly overlap in scope and contain equivalent entries under different identifiers. Maintaining mappings for these relationships is crucial for interoperability and the integration of data and knowledge.… read more here.
Keywords: prediction curation; biomedical identifier; curation; missing mappings ... See more keywords
On expert curation and scalability: UniProtKB/Swiss-Prot as a case study
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DOI: 10.1093/bioinformatics/btx439
Abstract: Motivation Biological knowledgebases, such as UniProtKB/Swiss‐Prot, constitute an essential component of daily scientific research by offering distilled, summarized and computable knowledge extracted from the literature by expert curators. While knowledgebases play an increasingly important role… read more here.
Keywords: uniprotkb swiss; swiss prot; curation; prot case ... See more keywords
Natural language inference for curation of structured clinical registries from unstructured text
Sign Up to like & getrecommendations! Published in 2021 at "Journal of the American Medical Informatics Association : JAMIA"
DOI: 10.1093/jamia/ocab243
Abstract: OBJECTIVE Clinical registries-structured databases of demographic, diagnosis, and treatment information-play vital roles in retrospective studies, operational planning, and assessment of patient eligibility for research, including clinical trials. Registry curation, a manual and time-intensive process, is… read more here.
Keywords: natural language; language inference; clinical registries; oncology ... See more keywords