A High‐Throughput Process for the Solid‐Phase Purification of Synthetic DNA Sequences
Sign Up to like & getrecommendations! Published in 2017 at "Current Protocols in Nucleic Acid Chemistry"
DOI: 10.1002/cpnc.31
Abstract: An efficient process for the purification of synthetic phosphorothioate and native DNA sequences is presented. The process is based on the use of an aminopropylated silica gel support functionalized with aminooxyalkyl functions to enable capture… read more here.
Keywords: dna sequences; dna; solid phase; process ... See more keywords
Analysis of Regulatory DNA Sequences by Dual-Luciferase Reporter Assays in Ewing Sarcoma.
Sign Up to like & getrecommendations! Published in 2021 at "Methods in molecular biology"
DOI: 10.1007/978-1-0716-1020-6_10
Abstract: Reporter gene assays allow for examining the influence of regulatory DNA sequences on the transcription of target genes. In Ewing sarcoma, the study of these DNA sequences is especially paramount for its main driver mutation… read more here.
Keywords: reporter; regulatory dna; dna sequences; dna ... See more keywords
A pattern recognition model to distinguish cancerous DNA sequences via signal processing methods
Sign Up to like & getrecommendations! Published in 2020 at "Soft Computing"
DOI: 10.1007/s00500-020-04942-4
Abstract: Cancer is one of the life-threatening diseases caused by changes in the structure of genetic components of the cell. DNA sequences are one of the most important factors in the formation and spread of this… read more here.
Keywords: pattern recognition; dna sequences; signal processing; model ... See more keywords
DNA Data Storage in Perl
Sign Up to like & getrecommendations! Published in 2020 at "Biotechnology and Bioprocess Engineering"
DOI: 10.1007/s12257-020-0022-9
Abstract: Here we report a simple and flexible method for DNA data storage based on Perl script. For this approach, the text data of the preamble of the “Universal Declaration of Human Rights” consisting of 2,046… read more here.
Keywords: storage; dna sequences; dna; perl ... See more keywords
A sequence-based approach for identifying recombination spots in Saccharomyces cerevisiae by using hyper-parameter optimization in FastText and support vector machine
Sign Up to like & getrecommendations! Published in 2019 at "Chemometrics and Intelligent Laboratory Systems"
DOI: 10.1016/j.chemolab.2019.103855
Abstract: Abstract Meiotic recombination is a biological process which plays a crucial role in genetic evolution. Therefore, the ability of machine learning models in extracting desire information embedded in DNA sequences has drawn a great deal… read more here.
Keywords: machine; dna sequences; recombination spots; approach ... See more keywords
Improving hash-q exact string matching algorithm with perfect hashing for DNA sequences
Sign Up to like & getrecommendations! Published in 2021 at "Computers in biology and medicine"
DOI: 10.1016/j.compbiomed.2021.104292
Abstract: Exact string matching algorithms involve finding all occurrences of a pattern P in a text T. These algorithms have been extensively studied in computer science, primarily because of their applications in various fields such as… read more here.
Keywords: hash; dna sequences; exact string; string matching ... See more keywords
The WM-q multiple exact string matching algorithm for DNA sequences
Sign Up to like & getrecommendations! Published in 2021 at "Computers in biology and medicine"
DOI: 10.1016/j.compbiomed.2021.104656
Abstract: The string matching algorithms are among the essential fields in computer science, such as text search, intrusion detection systems, fraud detection, sequence search in bioinformatics. The exact string matching algorithms are divided into two parts:… read more here.
Keywords: dna sequences; exact string; multiple exact; string matching ... See more keywords
A multiplex real-time PCR approach for identification and quantification of sheep/goat, fox and murine fractions in meats using nuclear DNA sequences
Sign Up to like & getrecommendations! Published in 2021 at "Food Control"
DOI: 10.1016/j.foodcont.2021.108035
Abstract: Abstract Adulterating undeclared animal components into meats may cause health problems. In this study, nuclear DNA sequences for specific detection of sheep/goat, fox and murine (mouse, rat and hamster) were selected to design primers and… read more here.
Keywords: nuclear dna; dna; goat fox; pcr ... See more keywords
Complete mitochondrial genomes of the Spondias tuberosa Arr. Cam and Spondias mombin L. reveal highly repetitive DNA sequences
Sign Up to like & getrecommendations! Published in 2019 at "Gene"
DOI: 10.1016/j.gene.2019.144026
Abstract: Abstract Mitogenomes in plants are well-known as exhibiting high diversity in genome size architecture and repetitive DNA sequences. In this research study, we report on the complete mitochondrial genomes of S. tuberosa and S. mombin… read more here.
Keywords: repetitive dna; mitochondrial genomes; dna; complete mitochondrial ... See more keywords
Metal Sensing by DNA.
Sign Up to like & getrecommendations! Published in 2017 at "Chemical reviews"
DOI: 10.1021/acs.chemrev.7b00063
Abstract: Metal ions are essential to many chemical, biological, and environmental processes. In the past two decades, many DNA-based metal sensors have emerged. While the main biological role of DNA is to store genetic information, its… read more here.
Keywords: dna sequences; dna; metal binding; metal ... See more keywords
Isolation and characterization of centromeric repetitive DNA sequences in Saccharum spontaneum
Sign Up to like & getrecommendations! Published in 2017 at "Scientific Reports"
DOI: 10.1038/srep41659
Abstract: Sugarcane (Saccharum hybrids spp.) is the most important sugar crop that accounts for ~75% of the world’s sugar production. Recently, a whole-genome sequencing project was launched on the wild species S. spontaneum. To obtain information… read more here.
Keywords: isolation characterization; dna sequences; dna; spontaneum ... See more keywords