Data Analysis for DNA Stable Isotope Probing Experiments Using Multiple Window High-Resolution SIP.
Sign Up to like & getrecommendations! Published in 2019 at "Methods in molecular biology"
DOI: 10.1007/978-1-4939-9721-3_9
Abstract: DNA stable isotope probing (DNA-SIP) allows for the identification of microbes that assimilate isotopically labeled substrates into DNA. Here we describe the analysis of sequencing data using the multiple window high-resolution DNA-SIP method (MW-HR-SIP). MW-HR-SIP… read more here.
Keywords: dna stable; isotope probing; dna; analysis ... See more keywords
Identification of Bisphenol A-Assimilating Microorganisms in Mixed Microbial Communities Using 13C-DNA Stable Isotope Probing.
Sign Up to like & getrecommendations! Published in 2018 at "Environmental science & technology"
DOI: 10.1021/acs.est.8b01976
Abstract: A wide range of trace organic contaminants (TOrCs), including the endocrine-disrupting compound bisphenol A (BPA), are subject to microbial transformations during biological wastewater treatment. However, relatively little is known about the identity of organisms capable… read more here.
Keywords: dna stable; bpa; dna; 13c dna ... See more keywords
Evolutionary history and palaeoecology of brown bear in North-East Siberia re-examined using ancient DNA and stable isotopes from skeletal remains
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DOI: 10.1038/s41598-019-40168-7
Abstract: Over 60% of the modern distribution range of brown bears falls within Russia, yet palaeoecological data from the region remain scarce. Complete modern Russian brown bear mitogenomes are abundant in the published literature, yet examples… read more here.
Keywords: dna stable; ancient dna; history palaeoecology; brown bear ... See more keywords
Identification of active denitrifiers by DNA‐stable isotope probing and amplicon sequencing reveals Betaproteobacteria as responsible for attenuation of nitrate contamination in a low impacted aquifer
Sign Up to like & getrecommendations! Published in 2018 at "FEMS Microbiology Ecology"
DOI: 10.1093/femsec/fix181
Abstract: ABSTRACT Groundwater reservoirs constitute important freshwater resources. However, these ecosystems are highly vulnerable to contamination and have to rely on the resident microbiota to attenuate the impact of this contamination. Nitrate is one of the… read more here.
Keywords: dna stable; isotope probing; impacted aquifer; low impacted ... See more keywords
Anaerobic sulfamethoxazole-degrading bacterial consortia in antibiotic-contaminated wetland sediments identified by DNA-stable isotope probing and metagenomics analysis.
Sign Up to like & getrecommendations! Published in 2022 at "Environmental microbiology"
DOI: 10.1111/1462-2920.16091
Abstract: Anaerobic degradation has been demonstrated as an important pathway for the removal of sulfonamide (SA) in contaminated environments, and identifying the microorganisms responsible for the degradation of SA is a key step in developing bioaugmentation… read more here.
Keywords: stable isotope; dna; smx; wetland sediments ... See more keywords