Genome-Wide Identification of Regulatory DNA Elements in Crop Plants.
Sign Up to like & getrecommendations! Published in 2020 at "Methods in molecular biology"
DOI: 10.1007/978-1-4939-9865-4_8
Abstract: cis-regulatory DNA elements (CREs) are noncoding but functional DNA sequences. The binding of regulatory proteins into CRE regions leads to chromatin high sensitive to DNase I digestion, which are termed as DNase I hypersensitive sites… read more here.
Keywords: dnase; regulatory dna; dnase seq; dna elements ... See more keywords
Unique and assay specific features of NOMe-, ATAC- and DNase I-seq data
Sign Up to like & getrecommendations! Published in 2019 at "Nucleic Acids Research"
DOI: 10.1093/nar/gkz799
Abstract: Abstract Chromatin accessibility maps are important for the functional interpretation of the genome. Here, we systematically analysed assay specific differences between DNase I-seq, ATAC-seq and NOMe-seq in a side by side experimental and bioinformatic setup.… read more here.
Keywords: seq; nome seq; unique assay; dnase seq ... See more keywords