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Published in 2019 at "Cluster Computing"
DOI: 10.1007/s10586-018-02893-y
Abstract: Containers are a widely successful technology today popularized by Docker. They improve system utilization by increasing workload density and enable seamless deployment of workloads across development, test, and production environments. Docker’s unique approach to data…
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Keywords:
docker;
storage performance;
evaluating docker;
docker storage ... See more keywords
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Published in 2020 at "Cluster Computing"
DOI: 10.1007/s10586-020-03210-2
Abstract: Containerization technology utilizes operating system level virtualization to package applications to run with required libraries and are isolated from other processes on the same host. Lightweight and quick deployment make containers popular in many data…
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Keywords:
docker;
container;
machine learning;
docker swarm ... See more keywords
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Published in 2022 at "Empirical Software Engineering"
DOI: 10.1007/s10664-021-10081-7
Abstract: In software development, ad hoc solutions that are intentionally implemented by developers are called self-admitted technical debt (SATD). Because the existence of SATD spreads poor implementations, it is necessary to remove it as soon as…
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Keywords:
container;
admitted technical;
docker;
technical debt ... See more keywords
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Published in 2022 at "IEEE Access"
DOI: 10.1109/access.2021.3137671
Abstract: Cloud computing and Infrastructure-as-Code (IaC), supported by technologies such as Docker, have shaped how many software systems are built and deployed. Previous research has identified typical issues for some types of IaC specification but not…
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Keywords:
docker;
compose specifications;
docker docker;
docker compose ... See more keywords
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Published in 2018 at "IEEE Communications Magazine"
DOI: 10.1109/mcom.2018.1701233
Abstract: The world of connected devices has led to the rise of the Internet of Things paradigm, where applications rely on multiple devices, gathering and sharing data across highly heterogeneous networks. The variety of possible mechanisms,…
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Keywords:
docker;
edge computing;
edge;
orchestration microservices ... See more keywords
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Published in 2019 at "IEEE Transactions on Software Engineering"
DOI: 10.1109/tse.2019.2956919
Abstract: Q&A forums are today a valuable tool to assist developers in programming tasks. Unfortunately, contributions to these forums are often unclear and incomplete. Docker is a container solution that enables software developers to encapsulate an…
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Keywords:
docker;
using docker;
creating containers;
stack overflow ... See more keywords
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Published in 2018 at "BMC Medical Informatics and Decision Making"
DOI: 10.1186/s12911-018-0646-2
Abstract: BackgroundInformatics for Integrating Biology and the Bedside (i2b2) is an open source clinical data analytics platform used at over 200 healthcare institutions for querying patient data. The i2b2 platform has several components with numerous dependencies…
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Keywords:
docker;
i2b2 platform;
integrating biology;
platform ... See more keywords
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Published in 2017 at "F1000Research"
DOI: 10.12688/f1000research.10137.1
Abstract: As genomic datasets continue to grow, the feasibility of downloading data to a local organization and running analysis on a traditional compute environment is becoming increasingly problematic. Current large-scale projects, such as the ICGC PanCancer…
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Keywords:
docker;
enabling modular;
dockstore enabling;
genomics tools ... See more keywords
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Published in 2021 at "Entropy"
DOI: 10.3390/e23070914
Abstract: With the advent of microservice-based software architectures, an increasing number of modern cloud environments and enterprises use operating system level virtualization, which is often referred to as container infrastructures. Docker Swarm is one of the…
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Keywords:
docker;
container;
docker swarm;
leadership hijacking ... See more keywords
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Published in 2017 at "PeerJ"
DOI: 10.7717/peerj.3948
Abstract: Recently, Docker technology has received increasing attention throughout the bioinformatics community. However, its implementation has not yet been mastered by most biologists; accordingly, its application in biological research has been limited. In order to popularize…
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Keywords:
docker;
pan genomes;
visualization;
genomes biosynthetic ... See more keywords