Articles with "dynamics loop" as a keyword



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Conformational Dynamics of Loop L3 in OmpF: Implications toward Antibiotic Translocation and Voltage Gating

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Published in 2022 at "Journal of chemical information and modeling"

DOI: 10.1021/acs.jcim.2c01108

Abstract: In the present work, we delineate the molecular mechanism of a bulky antibiotic permeating through a bacterial channel and uncover the role of conformational dynamics of the constriction loop in this process. Using the temperature… read more here.

Keywords: loop ompf; ompf implications; dynamics loop; hydrogen bond ... See more keywords
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Preinflationary dynamics in loop quantum cosmology: monodromy potential

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Published in 2018 at "Journal of Cosmology and Astroparticle Physics"

DOI: 10.1088/1475-7516/2018/11/003

Abstract: In this article we explore the pre-inflationary background dynamics of an FLRW universe sourced by a scalar field with monodromy potential in LQC framework. In particular we calculate the number of e-folds, Ninf, produced during… read more here.

Keywords: cosmology; dynamics loop; monodromy potential; quantum cosmology ... See more keywords
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Phosphorylation, Mg-ADP, and Inhibitors Differentially Shape the Conformational Dynamics of the A-Loop of Aurora-A

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Published in 2021 at "Biomolecules"

DOI: 10.3390/biom11040567

Abstract: The conformational state of the activation loop (A-loop) is pivotal for the activity of most protein kinases. Hence, the characterization of the conformational dynamics of the A-loop is important to increase our understanding of the… read more here.

Keywords: conformational dynamics; dynamics loop; loop aurora; phosphorylation adp ... See more keywords