PyCGTOOL: Automated Generation of Coarse-Grained Molecular Dynamics Models from Atomistic Trajectories
Sign Up to like & getrecommendations! Published in 2017 at "Journal of chemical information and modeling"
DOI: 10.1021/acs.jcim.7b00096
Abstract: Development of coarse-grained (CG) molecular dynamics models is often a laborious process which commonly relies upon approximations to similar models, rather than systematic parametrization. PyCGTOOL automates much of the construction of CG models via calculation… read more here.
Keywords: dynamics models; molecular dynamics; grained molecular; coarse grained ... See more keywords
Analysis of latent CHIKV dynamics models with general incidence rate and time delays
Sign Up to like & getrecommendations! Published in 2018 at "Journal of Biological Dynamics"
DOI: 10.1080/17513758.2018.1503349
Abstract: ABSTRACT In this paper, we study the stability analysis of latent Chikungunya virus (CHIKV) dynamics models. The incidence rate between the CHIKV and the uninfected monocytes is modelled by a general nonlinear function which satisfies… read more here.
Keywords: dynamics models; incidence rate; chikv dynamics; chikv ... See more keywords
Analysis of microalgae dynamics models
Sign Up to like & getrecommendations! Published in 2020 at "Biofuels"
DOI: 10.1080/17597269.2017.1387747
Abstract: ABSTRACT Microalgae are considered to be a very important biofuel producer, under conditions of nitrogen deprivation. The Droop model has been widely used to predict microalgal behavior. The Droop model equations have been modified to… read more here.
Keywords: dynamics models; analysis microalgae; droop model; model ... See more keywords
Accelerated Adaptive Gradient Neural Dynamics Models for Solving Time-Variant Lyapunov Equation and Their Applications
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DOI: 10.1109/access.2023.3261246
Abstract: The time-variant Lyapunov equation (TVLE) has played an important role in many fields due to its ubiquity and many neural dynamics models have been developed to obtain the online solution of the TVLE. In prevalent… read more here.
Keywords: time; neural dynamics; variant lyapunov; dynamics models ... See more keywords
Stability of delayed HIV dynamics models with two latent reservoirs and immune impairment
Sign Up to like & getrecommendations! Published in 2018 at "Advances in Difference Equations"
DOI: 10.1186/s13662-018-1869-3
Abstract: The purpose of this paper is to investigate the qualitative behavior of HIV dynamics models with immune impairment. The HIV particles infect both CD4+ T cells and macrophages. Both latently and actively infected cells are… read more here.
Keywords: dynamics models; hiv dynamics; hiv; stability delayed ... See more keywords
Dynamic Parameter Calibration Framework for Opinion Dynamics Models
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DOI: 10.3390/e24081112
Abstract: In the past decade, various opinion dynamics models have been built to depict the evolutionary mechanism of opinions and use them to predict trends in public opinion. However, model-based predictions alone cannot eliminate the deviation… read more here.
Keywords: public opinion; opinion dynamics; opinion; dynamic parameter ... See more keywords
Epigenetic Regulatory Dynamics in Models of Methamphetamine-Use Disorder
Sign Up to like & getrecommendations! Published in 2021 at "Genes"
DOI: 10.3390/genes12101614
Abstract: Methamphetamine (METH)-use disorder (MUD) is a very serious, potentially lethal, biopsychosocial disease. Exposure to METH causes long-term changes to brain regions involved in reward processing and motivation, leading vulnerable individuals to engage in pathological drug-seeking… read more here.
Keywords: dynamics models; disorder; regulatory dynamics; epigenetic regulatory ... See more keywords