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   Articles with "edna metabarcoding" as a keyword



Comparative assessment of eDNA metabarcoding and longline deployments for elasmobranch surveying across a large tropical marine park network

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recommendations! Published in 2024 at "Aquatic Conservation: Marine and Freshwater Ecosystems"

DOI: 10.1002/aqc.4144

Abstract: Medium‐ to large‐scale marine protected areas (MPAs) are playing an increasingly important role in global marine biodiversity conservation. A key question is “how do we collect relevant data on biodiversity and population trends to inform… read more here.

Keywords: edna metabarcoding; longline deployments; network; elasmobranch surveying ... See more keywords

Using eDNA metabarcoding to understand the effect of fire on the diet of small mammals in a woodland ecosystem

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recommendations! Published in 2022 at "Ecology and Evolution"

DOI: 10.1002/ece3.9457

Abstract: Abstract Food acquisition is a fundamental process that drives animal distribution and abundance, influencing how species respond to changing environments. Disturbances such as fire create significant shifts in available dietary resources, yet, for many species,… read more here.

Keywords: using edna; effect fire; food; fire ... See more keywords
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Benthic eDNA metabarcoding provides accurate assessments of impact from oil extraction, and ecological insights

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recommendations! Published in 2021 at "Ecological Indicators"

DOI: 10.1016/j.ecolind.2021.108064

Abstract: Abstract Apart from its contribution to climate change, offshore oil and gas extraction is also a potential threat to the diversity and function of marine ecosystems. Routine monitoring of the environmental status of affected areas… read more here.

Keywords: metabarcoding provides; edna metabarcoding; oil; provides accurate ... See more keywords

Past, present, and future perspectives of environmental DNA (eDNA) metabarcoding: A systematic review in methods, monitoring, and applications of global eDNA

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recommendations! Published in 2019 at "Global Ecology and Conservation"

DOI: 10.1016/j.gecco.2019.e00547

Abstract: Abstract Environmental DNA (eDNA) metabarcoding is a novel method of assessing biodiversity wherein samples are taken from the environment via water, sediment or air from which DNA is extracted, and then amplified using general or… read more here.

Keywords: dna; edna metabarcoding; monitoring; edna ... See more keywords

Predicting the Ecological Quality Status of Marine Environments from eDNA Metabarcoding Data Using Supervised Machine Learning.

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recommendations! Published in 2017 at "Environmental science & technology"

DOI: 10.1021/acs.est.7b01518

Abstract: Monitoring biodiversity is essential to assess the impacts of increasing anthropogenic activities in marine environments. Traditionally, marine biomonitoring involves the sorting and morphological identification of benthic macro-invertebrates, which is time-consuming and taxonomic-expertise demanding. High-throughput amplicon… read more here.

Keywords: status; edna metabarcoding; marine environments; ecological quality ... See more keywords

Usefulness and limitations of sample pooling for environmental DNA metabarcoding of freshwater fish communities

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recommendations! Published in 2017 at "Scientific Reports"

DOI: 10.1038/s41598-017-14978-6

Abstract: Environmental DNA (eDNA) metabarcoding has been used increasingly to assess biodiversity of aquatic vertebrates. However, there still remains to be developed a sampling design of eDNA metabarcoding that can ensure high detection rates of species… read more here.

Keywords: fish communities; edna metabarcoding; environmental dna; usefulness limitations ... See more keywords
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eDNA metabarcoding of small plankton samples to detect fish larvae and their preys from Atlantic and Pacific waters

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recommendations! Published in 2021 at "Scientific Reports"

DOI: 10.1038/s41598-021-86731-z

Abstract: Zooplankton community inventories are the basis of fisheries management for containing fish larvae and their preys; however, the visual identification of early-stage larvae (the “missing biomass”) is difficult and laborious. Here, eDNA metabarcoding was employed… read more here.

Keywords: metabarcoding small; edna metabarcoding; pacific; larvae ... See more keywords

eDNA metabarcoding reveals differences in fish diversity and community structure in Danjiang River

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recommendations! Published in 2024 at "Scientific Reports"

DOI: 10.1038/s41598-024-80907-z

Abstract: Fish diversity, an important indicator of aquatic ecosystem health, is declining due to water pollution, overfishing, climate change, and invasive species. Effective surveying and monitoring are required to protect fish diversity. Here, a high-sensitivity environmental… read more here.

Keywords: danjiang river; diversity; fish diversity; edna metabarcoding ... See more keywords

Water eDNA metabarcoding is effective in detecting non-native species in marinas, but detection errors still hinder its use for passive monitoring

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recommendations! Published in 2022 at "Biofouling"

DOI: 10.1080/08927014.2022.2075739

Abstract: Abstract Marinas are high-priority targets for marine non-indigenous species (NIS), where they compose a large portion of the biofouling communities. The practicality of water samples collection makes environmental DNA (eDNA) metabarcoding an interesting tool for… read more here.

Keywords: water edna; nis; metabarcoding effective; water ... See more keywords

Environmental DNA metabarcoding for monitoring fish biodiversity in remote lakes

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recommendations! Published in 2025 at "North American Journal of Fisheries Management"

DOI: 10.1093/najfmt/vqaf106

Abstract: Environmental DNA (eDNA) metabarcoding provides an attractive option for monitoring biodiversity in remote freshwater ecosystems, where the deployment of conventional gears encounters major logistical constraints. We evaluated eDNA metabarcoding for monitoring fish communities and early… read more here.

Keywords: edna metabarcoding; metabarcoding monitoring; biodiversity remote; monitoring fish ... See more keywords

Complementary roles of eDNA metabarcoding and microscopy in plankton monitoring across seven habitats

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recommendations! Published in 2024 at "Journal of Plankton Research"

DOI: 10.1093/plankt/fbae052

Abstract: Plankton biodiversity in aquatic ecosystems is currently investigated by labor-intensive and time-consuming microscope identification. Environmental DNA (eDNA) metabarcoding is emerging as a highly effective and objective tool for assessing biodiversity. In this study, we compared… read more here.

Keywords: edna metabarcoding; plankton; microscope identification; seven habitats ... See more keywords