Using eDNA metabarcoding to understand the effect of fire on the diet of small mammals in a woodland ecosystem
Sign Up to like & getrecommendations! Published in 2022 at "Ecology and Evolution"
DOI: 10.1002/ece3.9457
Abstract: Abstract Food acquisition is a fundamental process that drives animal distribution and abundance, influencing how species respond to changing environments. Disturbances such as fire create significant shifts in available dietary resources, yet, for many species,… read more here.
Keywords: using edna; effect fire; food; fire ... See more keywords
Benthic eDNA metabarcoding provides accurate assessments of impact from oil extraction, and ecological insights
Sign Up to like & getrecommendations! Published in 2021 at "Ecological Indicators"
DOI: 10.1016/j.ecolind.2021.108064
Abstract: Abstract Apart from its contribution to climate change, offshore oil and gas extraction is also a potential threat to the diversity and function of marine ecosystems. Routine monitoring of the environmental status of affected areas… read more here.
Keywords: metabarcoding provides; edna metabarcoding; oil; provides accurate ... See more keywords
Past, present, and future perspectives of environmental DNA (eDNA) metabarcoding: A systematic review in methods, monitoring, and applications of global eDNA
Sign Up to like & getrecommendations! Published in 2019 at "Global Ecology and Conservation"
DOI: 10.1016/j.gecco.2019.e00547
Abstract: Abstract Environmental DNA (eDNA) metabarcoding is a novel method of assessing biodiversity wherein samples are taken from the environment via water, sediment or air from which DNA is extracted, and then amplified using general or… read more here.
Keywords: dna; edna metabarcoding; monitoring; edna ... See more keywords
Predicting the Ecological Quality Status of Marine Environments from eDNA Metabarcoding Data Using Supervised Machine Learning.
Sign Up to like & getrecommendations! Published in 2017 at "Environmental science & technology"
DOI: 10.1021/acs.est.7b01518
Abstract: Monitoring biodiversity is essential to assess the impacts of increasing anthropogenic activities in marine environments. Traditionally, marine biomonitoring involves the sorting and morphological identification of benthic macro-invertebrates, which is time-consuming and taxonomic-expertise demanding. High-throughput amplicon… read more here.
Keywords: status; edna metabarcoding; marine environments; ecological quality ... See more keywords
Usefulness and limitations of sample pooling for environmental DNA metabarcoding of freshwater fish communities
Sign Up to like & getrecommendations! Published in 2017 at "Scientific Reports"
DOI: 10.1038/s41598-017-14978-6
Abstract: Environmental DNA (eDNA) metabarcoding has been used increasingly to assess biodiversity of aquatic vertebrates. However, there still remains to be developed a sampling design of eDNA metabarcoding that can ensure high detection rates of species… read more here.
Keywords: fish communities; edna metabarcoding; environmental dna; usefulness limitations ... See more keywords
eDNA metabarcoding of small plankton samples to detect fish larvae and their preys from Atlantic and Pacific waters
Sign Up to like & getrecommendations! Published in 2021 at "Scientific Reports"
DOI: 10.1038/s41598-021-86731-z
Abstract: Zooplankton community inventories are the basis of fisheries management for containing fish larvae and their preys; however, the visual identification of early-stage larvae (the “missing biomass”) is difficult and laborious. Here, eDNA metabarcoding was employed… read more here.
Keywords: metabarcoding small; edna metabarcoding; pacific; larvae ... See more keywords
Water eDNA metabarcoding is effective in detecting non-native species in marinas, but detection errors still hinder its use for passive monitoring
Sign Up to like & getrecommendations! Published in 2022 at "Biofouling"
DOI: 10.1080/08927014.2022.2075739
Abstract: Abstract Marinas are high-priority targets for marine non-indigenous species (NIS), where they compose a large portion of the biofouling communities. The practicality of water samples collection makes environmental DNA (eDNA) metabarcoding an interesting tool for… read more here.
Keywords: water edna; nis; metabarcoding effective; water ... See more keywords
Identifying error and accurately interpreting environmental DNA metabarcoding results: A case study to detect vertebrates at arid zone waterholes
Sign Up to like & getrecommendations! Published in 2020 at "Molecular Ecology Resources"
DOI: 10.1111/1755-0998.13170
Abstract: Environmental DNA (eDNA) metabarcoding surveys enable rapid, noninvasive identification of taxa from trace samples with wide‐ranging applications from characterizing local biodiversity to identifying food‐web interactions. However, the technique is prone to error from two major… read more here.
Keywords: edna metabarcoding; environmental dna; dna; error ... See more keywords
Quantitative monitoring of diverse fish communities on a large scale combining eDNA metabarcoding and qPCR
Sign Up to like & getrecommendations! Published in 2022 at "Molecular Ecology Resources"
DOI: 10.1111/1755-0998.13715
Abstract: Environmental DNA (eDNA) metabarcoding is an effective method for studying fish communities but allows only an estimation of relative species abundance (density/biomass). Here, we combine metabarcoding with an estimation of the total abundance of eDNA… read more here.
Keywords: fish communities; quantitative monitoring; metabarcoding qpcr; abundance ... See more keywords
eDNA metabarcoding of avocado flowers: 'Hass' it got potential to survey arthropods in food production systems?
Sign Up to like & getrecommendations! Published in 2023 at "Molecular ecology resources"
DOI: 10.1111/1755-0998.13814
Abstract: In the face of global biodiversity declines, surveys of beneficial and antagonistic arthropod diversity as well as the ecological services that they provide are increasingly important in both natural and agro-ecosystems. Conventional survey methods used… read more here.
Keywords: edna metabarcoding; survey; metabarcoding flowers; across three ... See more keywords
Capturing open ocean biodiversity: Comparing environmental DNA metabarcoding to the continuous plankton recorder
Sign Up to like & getrecommendations! Published in 2020 at "Molecular Ecology"
DOI: 10.1111/mec.15587
Abstract: Environmental DNA (eDNA) metabarcoding is emerging as a novel, objective tool for monitoring marine metazoan biodiversity. Zooplankton biodiversity in the vast open ocean is currently monitored through continuous plankton recorder (CPR) surveys, using ship‐based bulk… read more here.
Keywords: edna metabarcoding; dna; cpr; plankton ... See more keywords