Efficient taxa identification using a pangenome index.
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DOI: 10.1101/gr.277642.123
Abstract: Tools that classify sequencing reads against a database of reference sequences require efficient index data structures. The r-index is a compressed full-text index that answers substring presence/absence, count and locate queries in space proportional to… read more here.
Keywords: index; using pangenome; efficient taxa; pangenome index ... See more keywords