CLoNe: Automated clustering based on local density neighborhoods for application to biomolecular structural ensembles.
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DOI: 10.1093/bioinformatics/btaa742
Abstract: MOTIVATION Proteins are intrinsically dynamic entities. Flexibility sampling methods, such as molecular dynamics or those arising from integrative modeling strategies are now commonplace and enable the study of molecular conformational landscapes in many contexts. Resulting… read more here.
Keywords: local density; analysis; structural ensembles; ensembles clone ... See more keywords