Articles with "enzyme constrained" as a keyword



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Improving lysine production through construction of an Escherichia coli enzyme‐constrained model

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Published in 2020 at "Biotechnology and Bioengineering"

DOI: 10.1002/bit.27485

Abstract: Microbial cell factories are widely used for the production of high‐value chemicals. However, maximizing production titers is made difficult by the complicated regulatory mechanisms of these cell platforms. Here, kcat values were incorporated to construct… read more here.

Keywords: coli enzyme; production; escherichia coli; enzyme constrained ... See more keywords

Enzyme‐constrained models predict the dynamics of Saccharomyces cerevisiae growth in continuous, batch and fed‐batch bioreactors

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Published in 2022 at "Microbial Biotechnology"

DOI: 10.1111/1751-7915.13995

Abstract: Genome‐scale, constraint‐based models (GEM) and their derivatives are commonly used to model and gain insights into microbial metabolism. Often, however, their accuracy and predictive power are limited and enable only approximate designs. To improve their… read more here.

Keywords: batch; growth; models predict; enzyme constrained ... See more keywords

Enzyme-constrained metabolic model of Treponema pallidum identified glycerol-3-phosphate dehydrogenase as an alternate electron sink

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Published in 2025 at "mSystems"

DOI: 10.1128/msystems.01555-24

Abstract: ABSTRACT Treponema pallidum, the causative agent of syphilis, poses a significant global health threat. Its strict reliance on host-derived nutrients and difficulties in in vitro cultivation have impeded detailed metabolic characterization. In this study, we… read more here.

Keywords: host; metabolic model; model; treponema pallidum ... See more keywords

Construction and Analysis of an Enzyme-Constrained Metabolic Model of Corynebacterium glutamicum

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Published in 2022 at "Biomolecules"

DOI: 10.3390/biom12101499

Abstract: The genome-scale metabolic model (GEM) is a powerful tool for interpreting and predicting cellular phenotypes under various environmental and genetic perturbations. However, GEM only considers stoichiometric constraints, and the simulated growth and product yield values… read more here.

Keywords: corynebacterium glutamicum; enzyme constrained; glutamicum; model ... See more keywords