High genetic and epigenetic variation of transposable elements: Potential drivers to rapid adaptive evolution for the noxious invasive weed Mikania micrantha
Sign Up to like & getrecommendations! Published in 2021 at "Ecology and Evolution"
DOI: 10.1002/ece3.8075
Abstract: Abstract Why invasive species can rapidly adapt to novel environments is a puzzling question known as the genetic paradox of invasive species. This paradox is explainable in terms of transposable elements (TEs) activity, which are… read more here.
Keywords: variation; mikania micrantha; epigenetic variation; genetic epigenetic ... See more keywords
Whole-Genome Bisulfite Sequencing and Epigenetic Variation in Cereal Methylomes.
Sign Up to like & getrecommendations! Published in 2020 at "Methods in molecular biology"
DOI: 10.1007/978-1-4939-9865-4_10
Abstract: Whole-genome bisulfite sequencing (WGBS) is a technique used for the analysis of genome-wide DNA methylation patterns (DNA methylomes) at a single-base resolution. Here, I describe a simple DNA extraction method from rice endosperm and the… read more here.
Keywords: genome bisulfite; bisulfite; whole genome; bisulfite sequencing ... See more keywords
Genetic and epigenetic variation separately contribute to range expansion and local metalliferous habitat adaptation during invasions of Chenopodium ambrosioides into China.
Sign Up to like & getrecommendations! Published in 2022 at "Annals of botany"
DOI: 10.1093/aob/mcac139
Abstract: BACKGROUND AND AIMS Invasive plants often colonize wide-ranging geographical areas with various local microenvironments. The specific roles of epigenetic and genetic variation during such expansion are still unclear. Chenopodium ambrosioides is a well-known invasive alien… read more here.
Keywords: adaptation; epigenetic variation; variation; chenopodium ambrosioides ... See more keywords
Epigenetic and Genetic Contributions to Adaptation in Chlamydomonas
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DOI: 10.1093/molbev/msx166
Abstract: Epigenetic modifications, such as DNA methylation or histone modifications, can be transmitted between cellular or organismal generations. However, there are no experiments measuring their role in adaptation, so here we use experimental evolution to investigate… read more here.
Keywords: methylation; genetic contributions; epigenetic variation; epigenetic genetic ... See more keywords
The impact of environment on genetic and epigenetic variation in Trifolium pratense populations from two contrasting semi-natural grasslands
Sign Up to like & getrecommendations! Published in 2022 at "Royal Society Open Science"
DOI: 10.1098/rsos.211406
Abstract: Central European grasslands, such as calcareous grasslands and oat-grass meadows, are characterized by diverse environmental conditions and management regimes. Therefore, we aimed to determine potential differences in genetic and epigenetic variation patterns between the contrasting… read more here.
Keywords: environment; environmental conditions; variation; trifolium pratense ... See more keywords
Genetic and environmental drivers of large-scale epigenetic variation in Thlaspi arvense
Sign Up to like & getrecommendations! Published in 2022 at "PLOS Genetics"
DOI: 10.1101/2022.03.16.484610
Abstract: Natural plant populations often harbour substantial heritable variation in DNA methylation. However, a thorough understanding of the genetic and environmental drivers of this epigenetic variation requires large-scale and high-resolution data, which currently exist only for… read more here.
Keywords: dna; dna methylation; variation; epigenetic variation ... See more keywords
Applying gene‐editing technology to elucidate the functional consequence of genetic and epigenetic variation in Alzheimer’s disease
Sign Up to like & getrecommendations! Published in 2020 at "Brain Pathology"
DOI: 10.1111/bpa.12881
Abstract: Recent studies have highlighted a potential role of genetic and epigenetic variation in the development of Alzheimer’s disease. Application of the CRISPR‐Cas genome‐editing platform has enabled investigation of the functional impact that Alzheimer’s disease‐associated gene… read more here.
Keywords: alzheimer disease; disease; epigenetic variation; genetic epigenetic ... See more keywords
Epigenetics and reproductive isolation: a commentary on Westram et al., 2022
Sign Up to like & getrecommendations! Published in 2022 at "Journal of Evolutionary Biology"
DOI: 10.1111/jeb.14033
Abstract: Reproductive isolation (RI) is often considered an essential component of speciation; however, its definition varies, and it is challenging to measure, making it difficult to compare across studies. To help overcome these difficulties, Westram et… read more here.
Keywords: reproductive isolation; 2022 epigenetics; speciation; westram 2022 ... See more keywords
Genome‐wide epigenetic isolation by environment in a widespread Anolis lizard
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DOI: 10.1111/mec.15301
Abstract: Epigenetic changes can provide a pathway for organisms to respond to local environmental conditions by influencing gene expression. However, we still know little about the spatial distribution of epigenetic variation in natural systems, how it… read more here.
Keywords: genome wide; variation; isolation environment; epigenetic isolation ... See more keywords
Epigenetic variation between urban and rural populations of Darwin’s finches
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DOI: 10.1186/s12862-017-1025-9
Abstract: BackgroundThe molecular basis of evolutionary change is assumed to be genetic variation. However, growing evidence suggests that epigenetic mechanisms, such as DNA methylation, may also be involved in rapid adaptation to new environments. An important… read more here.
Keywords: rural populations; variation; darwin finches; urban rural ... See more keywords
Comparisons of Natural and Cultivated Populations of Corydalis yanhusuo Indicate Divergent Patterns of Genetic and Epigenetic Variation
Sign Up to like & getrecommendations! Published in 2020 at "Frontiers in Plant Science"
DOI: 10.3389/fpls.2020.00985
Abstract: Epigenetic variation may contribute to traits that are important in domestication, but how patterns of genetic and epigenetic variation differ between cultivated and wild plants remains poorly understood. In particular, we know little about how… read more here.
Keywords: variation; cultivated populations; natural cultivated; patterns genetic ... See more keywords