In silico functional and evolutionary analyses of rubber oxygenases (RoxA and RoxB)
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DOI: 10.1007/s13205-020-02371-6
Abstract: The study presents an in silico identification of poly (cis-1,4-isoprene) cleaving enzymes, viz., RoxA and RoxB in bacteria, followed by their functional and evolutionary exploration using comparative genomics. The orthologs of these proteins were found… read more here.
Keywords: analyses rubber; evolutionary analyses; roxa roxb; functional evolutionary ... See more keywords
SynGenes: a Python class for standardizing nomenclatures of mitochondrial and chloroplast genes and a web form for enhancing searches for evolutionary analyses
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DOI: 10.1186/s12859-024-05781-y
Abstract: Background The reconstruction of the evolutionary history of organisms has been greatly influenced by the advent of molecular techniques, leading to a significant increase in studies utilizing genomic data from different species. However, the lack… read more here.
Keywords: evolutionary analyses; web form; searches evolutionary; gene ... See more keywords
Structural and Evolutionary Analyses of PR-4 SUGARWINs Points to a Different Pattern of Protein Function
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DOI: 10.3389/fpls.2021.734248
Abstract: SUGARWINs are PR-4 proteins associated with sugarcane defense against phytopathogens. Their expression is induced in response to damage by Diatraea saccharalis larvae. These proteins play an important role in plant defense, in particular against fungal… read more here.
Keywords: protein; sugarwins points; evolutionary analyses; analyses sugarwins ... See more keywords
Evolutionary Analyses of Sequence and Structure Space Unravel the Structural Facets of SOD1
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DOI: 10.3390/biom9120826
Abstract: Superoxide dismutase (SOD) is the primary enzyme of the cellular antioxidant defense cascade. Misfolding, concomitant oligomerization, and higher order aggregation of human cytosolic SOD are linked to amyotrophic lateral sclerosis (ALS). Although, with two metal… read more here.
Keywords: analyses sequence; space; evolutionary analyses; sequence structure ... See more keywords