Evolutionary context can clarify gene names: Teleosts as a case study
Sign Up to like & getrecommendations! Published in 2021 at "BioEssays"
DOI: 10.1002/bies.202000258
Abstract: We developed an ex silico evolutionary‐based systematic synteny approach to define and name the duplicated genes in vertebrates. The first convention for the naming of genes relied on historical precedent, the order in the human… read more here.
Keywords: names teleosts; gene names; evolutionary context; context clarify ... See more keywords
ECNet is an evolutionary context-integrated deep learning framework for protein engineering
Sign Up to like & getrecommendations! Published in 2021 at "Nature Communications"
DOI: 10.1038/s41467-021-25976-8
Abstract: Machine learning has been increasingly used for protein engineering. However, because the general sequence contexts they capture are not specific to the protein being engineered, the accuracy of existing machine learning algorithms is rather limited.… read more here.
Keywords: protein; ecnet evolutionary; protein engineering; evolutionary context ... See more keywords
The comparative energetics of the ray-finned fish in an evolutionary context
Sign Up to like & getrecommendations! Published in 2022 at "Conservation Physiology"
DOI: 10.1093/conphys/coac039
Abstract: Life history and energetics of Actinopterygii are analysed using parameters and traits from the Add-my-Pet collection. Actinopterygii are the only vertebrate class that shows metabolic acceleration a short period after birth, and they are near… read more here.
Keywords: evolutionary context; fish evolutionary; energetics ray; comparative energetics ... See more keywords