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   Articles with "evolutionary rates" as a keyword



Drivers of avian genomic change revealed by evolutionary rate decomposition

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recommendations! Published in 2025 at "Nature"

DOI: 10.1038/s41586-025-08777-7

Abstract: Modern birds have diversified into a striking array of forms, behaviours and ecological roles. Analyses of molecular evolutionary rates can reveal the links between genomic and phenotypic change1, 2, 3–4, but disentangling the drivers of… read more here.

Keywords: evolutionary rates; evolutionary rate; rate; rate variation ... See more keywords

Amino acid compositions contribute to the proteins’ evolution under the influence of their abundances and genomic GC content

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recommendations! Published in 2018 at "Scientific Reports"

DOI: 10.1038/s41598-018-25364-1

Abstract: Inconsistent results on the association between evolutionary rates and amino acid composition of proteins have been reported in eukaryotes. However, there are few studies of how amino acid composition can influence evolutionary rates in bacteria.… read more here.

Keywords: amino acids; amino acid; evolutionary rates; acid composition ... See more keywords

RERconverge: an R package for associating evolutionary rates with convergent traits

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recommendations! Published in 2019 at "Bioinformatics"

DOI: 10.1093/bioinformatics/btz468

Abstract: MOTIVATION When different lineages of organisms independently adapt to similar environments, selection often acts repeatedly upon the same genes, leading to signatures of convergent evolutionary rate shifts at these genes. With the increasing availability of… read more here.

Keywords: rerconverge package; evolutionary rates; package associating; convergent traits ... See more keywords

RERconverge Expansion: Using Relative Evolutionary Rates to Study Complex Categorical Trait Evolution

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recommendations! Published in 2024 at "Molecular Biology and Evolution"

DOI: 10.1093/molbev/msae210

Abstract: Abstract Comparative genomics approaches seek to associate molecular evolution with the evolution of phenotypes across a phylogeny. Many of these methods lack the ability to analyze non-ordinal categorical traits with more than two categories. To… read more here.

Keywords: evolution; evolutionary rates; rerconverge expansion; rerconverge ... See more keywords
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Evolutionary Rates of Bumblebee Genomes Are Faster at Lower Elevations

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recommendations! Published in 2019 at "Molecular Biology and Evolution"

DOI: 10.1093/molbev/msz057

Abstract: Abstract The importance of climate in determining biodiversity patterns has been well documented. However, the relationship between climate and rates of genetic evolution remains controversial. Latitude and elevation have been associated with rates of change… read more here.

Keywords: evolutionary rates; lower elevations; faster lower; rates bumblebee ... See more keywords

Phylogenetic non-independence in rates of trait evolution

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recommendations! Published in 2018 at "Biology Letters"

DOI: 10.1098/rsbl.2018.0502

Abstract: Statistical non-independence of species’ biological traits is recognized in most traits under selection. Yet, whether or not the evolutionary rates of such biological traits are statistically non-independent remains to be tested. Here, we test the… read more here.

Keywords: non independence; non independent; evolutionary rates; phylogenetic non ... See more keywords

Recursive Paleohexaploidization Shaped the Durian Genome1[CC-BY]

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recommendations! Published in 2018 at "Plant Physiology"

DOI: 10.1104/pp.18.00921

Abstract: Durian genome reanalysis reveals a specific hexaploidization and a decaploidization in the cotton lineage that increased its evolutionary rate, explaining a previous misinterpretation. The durian (Durio zibethinus) genome has recently become available, and analysis of… read more here.

Keywords: recursive paleohexaploidization; decaploidization; evolutionary rates; genome ... See more keywords

Elevated evolutionary rates of biting biomechanics reveal patterns of extraordinary craniodental adaptations in some herbivorous dinosaurs

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recommendations! Published in 2024 at "Palaeontology"

DOI: 10.1111/pala.12689

Abstract: Adaptation to specialist ecological niches is a key innovation that has contributed to the evolutionary success of many vertebrate clades, underpinning the acquisition of diverse skull morphologies. Dinosaurs, which dominated Mesozoic terrestrial faunas, acquired herbivory… read more here.

Keywords: elevated evolutionary; evolutionary rates; biting biomechanics; rates biting ... See more keywords
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Dental evolutionary rates and its implications for the Neanderthal–modern human divergence

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recommendations! Published in 2019 at "Science Advances"

DOI: 10.1126/sciadv.aaw1268

Abstract: The analysis of dental evolutionary rates indicates that Neanderthals and modern humans diverged at least 800,000 years ago. The origin of Neanderthal and modern human lineages is a matter of intense debate. DNA analyses have… read more here.

Keywords: modern human; dental evolutionary; neanderthals modern; evolutionary rates ... See more keywords

Analysis of nematode-endosymbiont coevolution in the Xiphinema americanum species complex using molecular markers of variable evolutionary rates

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recommendations! Published in 2019 at "Nematology"

DOI: 10.1163/15685411-00003233

Abstract: Bacterial symbioses play important roles in shaping diverse biological processes in nematodes, and serve as targets in nematode biocontrol strategies. Focusing on the Xiphinema americanum species complex, we expanded upon recent research investigating patterns of… read more here.

Keywords: topology; coevolution xiphinema; xiphinema americanum; evolutionary rates ... See more keywords

Ten Plastomes of Crassula (Crassulaceae) and Phylogenetic Implications

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recommendations! Published in 2022 at "Biology"

DOI: 10.3390/biology11121779

Abstract: Simple Summary Plastids are semi-autonomous plant organelles which play critical roles in photosynthesis, stress response, and storage. The plastid genomes (plastomes) in angiosperms are relatively conserved in quadripartite structure, but variable in size, gene content,… read more here.

Keywords: crassula; phylogenetic implications; crassulaceae; evolutionary rates ... See more keywords