Articles with "expression atlas" as a keyword



Expression atlas of avian neural crest proteins: Neurulation to migration.

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Published in 2022 at "Developmental biology"

DOI: 10.1016/j.ydbio.2021.12.018

Abstract: Neural crest (NC) cells are a dynamic population of embryonic stem cells that create various adult tissues in vertebrate species including craniofacial bone and cartilage and the peripheral and enteric nervous systems. NC development is… read more here.

Keywords: expression; atlas avian; expression atlas; neural crest ... See more keywords

An integrated expression atlas of miRNAs and their promoters in human and mouse

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Published in 2017 at "Nature Biotechnology"

DOI: 10.1038/nbt.3947

Abstract: MicroRNAs (miRNAs) are short non-coding RNAs with key roles in cellular regulation. As part of the fifth edition of the Functional Annotation of Mammalian Genome (FANTOM5) project, we created an integrated expression atlas of miRNAs… read more here.

Keywords: mirnas promoters; atlas mirnas; integrated expression; human mouse ... See more keywords

Gene expression atlas of the Colorado potato beetle (Leptinotarsa decemlineata)

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Published in 2025 at "Scientific Data"

DOI: 10.1038/s41597-025-04607-7

Abstract: The Colorado potato beetle (CPB) is a major pest of potato crops, known for its remarkable ability to develop resistance to more than 50 pesticides. For decades, CPB has served as a model species for… read more here.

Keywords: gene expression; potato beetle; colorado potato; expression atlas ... See more keywords
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A gene expression atlas of adult Schistosoma mansoni and their gonads

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Published in 2017 at "Scientific Data"

DOI: 10.1038/sdata.2017.118

Abstract: RNA-Seq has proven excellence in providing information about the regulation and transcript levels of genes. We used this method for profiling genes in the flatworm Schistosoma mansoni. This parasite causes schistosomiasis, an infectious disease of… read more here.

Keywords: schistosoma mansoni; expression atlas; atlas adult; gene expression ... See more keywords

Expression Atlas: gene and protein expression across multiple studies and organisms

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Published in 2018 at "Nucleic Acids Research"

DOI: 10.1093/nar/gkx1158

Abstract: Abstract Expression Atlas (http://www.ebi.ac.uk/gxa) is an added value database that provides information about gene and protein expression in different species and contexts, such as tissue, developmental stage, disease or cell type. The available public and… read more here.

Keywords: protein expression; gene protein; expression atlas; expression ... See more keywords

Mayfly developmental atlas: developmental temporal expression atlas of the mayfly, Ephemera vulgata, reveals short germ-specific hox gene activation

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Published in 2024 at "BMC Genomics"

DOI: 10.1186/s12864-024-10934-7

Abstract: Over the course of evolution, insects have seen drastic changes in their mode of development. While insects with derived modes of development have been studied extensively, information on ancestral modes of development is lacking. To… read more here.

Keywords: short germ; temporal expression; expression atlas; expression ... See more keywords

FEAtl: a comprehensive web-based expression atlas for functional genomics in tropical and subtropical fruit crops

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Published in 2024 at "BMC Plant Biology"

DOI: 10.1186/s12870-024-05595-3

Abstract: Fruit crops, including tropical and subtropical fruits like Avocado (Persea americana), Fig (Ficus carica), Date Palm (Phoenix dactylifera), Mango (Mangifera indica), Guava (Psidium guajava), Papaya (Carica papaya), Pineapple (Ananas comosus), and Banana (Musa acuminata) are… read more here.

Keywords: fruit crops; functional genomics; fruit; tropical subtropical ... See more keywords

A gene expression atlas of Nicotiana tabacum across various tissues at transcript resolution

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Published in 2025 at "Frontiers in Plant Science"

DOI: 10.3389/fpls.2025.1500654

Abstract: Alternative splicing (AS) expands the transcriptome diversity by selectively splicing exons and introns from pre-mRNAs to generate different protein isoforms. This mechanism is widespread in eukaryotes and plays a crucial role in development, environmental adaptation,… read more here.

Keywords: resistance; gene expression; tobacco; expression atlas ... See more keywords

OliveAtlas: A Gene Expression Atlas Tool for Olea europaea

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Published in 2023 at "Plants"

DOI: 10.3390/plants12061274

Abstract: The olive (Olea europaea L.) is an ancient crop of great importance in the Mediterranean basin due to the production of olive oil and table olives, which are important sources of fat and have benefits… read more here.

Keywords: olea europaea; expression; gene expression; gene ... See more keywords