Self‐Folding Using Capillary Forces
Sign Up to like & getrecommendations! Published in 2019 at "Advanced Materials Interfaces"
DOI: 10.1002/admi.201901677
Abstract: Self-folding broadly refers to the assembly of 3D structures by bending, curving, and folding without the need for manual or mechanized intervention. Self-folding is scientifically interesting because examples of self-folded structures, from plant leaves to… read more here.
Keywords: medicine; using capillary; self folding; capillary forces ... See more keywords
A two-dimensional replica-exchange molecular dynamics method for simulating RNA folding using sparse experimental restraints.
Sign Up to like & getrecommendations! Published in 2019 at "Methods"
DOI: 10.1016/j.ymeth.2019.05.001
Abstract: We present a 2D replica exchange protocol incorporating secondary structure information to dramatically improve 3D RNA folding using molecular dynamics simulations. We show that incorporating base-pairing restraints into all-atom, explicit solvent simulations enables the accurate… read more here.
Keywords: molecular dynamics; replica exchange; rna; rna folding ... See more keywords
DrTransformer: heuristic cotranscriptional RNA folding using the nearest neighbor energy model
Sign Up to like & getrecommendations! Published in 2022 at "Bioinformatics"
DOI: 10.1093/bioinformatics/btad034
Abstract: Background Folding during transcription can have an important influence on the structure and function of ℝNA molecules, as regions closer to the 5’ end can fold into metastable structures before potentially stronger interactions with the… read more here.
Keywords: folding using; heuristic cotranscriptional; rna folding; transcription ... See more keywords