Proposal of Smith-Waterman algorithm on FPGA to accelerate the forward and backtracking steps
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DOI: 10.1371/journal.pone.0254736
Abstract: In bioinformatics, alignment is an essential technique for finding similarities between biological sequences. Usually, the alignment is performed with the Smith-Waterman (SW) algorithm, a well-known sequence alignment technique of high-level precision based on dynamic programming.… read more here.
Keywords: proposal smith; waterman algorithm; forward backtracking; backtracking steps ... See more keywords