Effect of hydraulic retention time on nitrogen removal and functional gene quantity/transcription in biochar packed reactors at 5 °C: A control-strategy study.
Sign Up to like & getrecommendations! Published in 2018 at "Bioresource technology"
DOI: 10.1016/j.biortech.2018.06.006
Abstract: This study investigated the effect of hydraulic retention time (HRT = 8, 12, 16, and 24 h) on effluent dissolved organic nitrogen (DON), dissolved total nitrogen (DTN), and functional gene quantity/transcription in biochar packed reactors over a 125-day… read more here.
Keywords: hydraulic retention; effect hydraulic; retention time; quantity ... See more keywords
A computational pipeline for functional gene discovery
Sign Up to like & getrecommendations! Published in 2021 at "Scientific Reports"
DOI: 10.1038/s41598-021-03041-0
Abstract: Many computational pipelines exist for the detection of differentially expressed genes. However, computational pipelines for functional gene detection rarely exist. We developed a new computational pipeline for functional gene identification from transcriptome profiling data. Key… read more here.
Keywords: pipeline functional; gene discovery; computational pipeline; pipeline ... See more keywords
IRIS-FGM: an integrative single-cell RNA-Seq interpretation system for functional gene module analysis
Sign Up to like & getrecommendations! Published in 2021 at "Bioinformatics"
DOI: 10.1093/bioinformatics/btab108
Abstract: MOTIVATION Single-cell RNA-Seq (scRNA-Seq) data is useful in discovering cell heterogeneity and signature genes in specific cell populations in cancer and other complex diseases. Specifically, the investigation of condition-specific functional gene modules (FGM) can help… read more here.
Keywords: seq; iris fgm; analysis; functional gene ... See more keywords
A cross-species co-functional gene network underlying leaf senescence
Sign Up to like & getrecommendations! Published in 2022 at "Horticulture Research"
DOI: 10.1093/hr/uhac251
Abstract: Abstract The complex leaf senescence process is governed by various levels of transcriptional and translational regulation. Several features of the leaf senescence process are similar across species, yet the extent to which the molecular mechanisms… read more here.
Keywords: network; functional gene; leaf senescence; cross species ... See more keywords
Functional Gene Diversity and Metabolic Potential of the Microbial Community in an Estuary-Shelf Environment
Sign Up to like & getrecommendations! Published in 2017 at "Frontiers in Microbiology"
DOI: 10.3389/fmicb.2017.01153
Abstract: Microbes play crucial roles in various biogeochemical processes in the ocean, including carbon (C), nitrogen (N), and phosphorus (P) cycling. Functional gene diversity and the structure of the microbial community determines its metabolic potential and… read more here.
Keywords: gene diversity; water; water masses; functional gene ... See more keywords
Enhanced Metabolic Potentials and Functional Gene Interactions of Microbial Stress Responses to a 4,100-m Elevational Increase in Freshwater Lakes
Sign Up to like & getrecommendations! Published in 2020 at "Frontiers in Microbiology"
DOI: 10.3389/fmicb.2020.595967
Abstract: Elevation has a strong influence on microbial community composition, but its influence on microbial functional genes remains unclear in the aquatic ecosystem. In this study, the functional gene structure of microbes in two lakes at… read more here.
Keywords: functional genes; stress; stress responses; functional gene ... See more keywords
Humic Lake Exhibits Higher Microbial Functional Gene Diversity and Weaker Gene Interaction Efficiency than a Common Alkaline Lake
Sign Up to like & getrecommendations! Published in 2022 at "Biology"
DOI: 10.3390/biology11101448
Abstract: Simple Summary The humic lake represents a special kind of aquatic ecosystem with high humic substances, low irradiance, and a high potential for greenhouse gas emissions. Despite the special environment and biogeochemical processes in humic… read more here.
Keywords: functional gene; humic lake; gene; gene diversity ... See more keywords