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   Articles with "functional prediction" as a keyword



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Functional Prediction of Hypothetical Transcription Factors of Escherichia coli K-12 Based on Expression Data

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recommendations! Published in 2018 at "Computational and Structural Biotechnology Journal"

DOI: 10.1016/j.csbj.2018.03.003

Abstract: The repertoire of 304 DNA-binding transcription factors (TFs) in Escherichia coli K-12 has been described recently, with 196 TFs experimentally characterized and 108 proteins predicted by sequence comparisons. Based on 303 expression profile patterns retrieved… read more here.

Keywords: escherichia coli; expression data; functional prediction; expression ... See more keywords
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Community composition and functional prediction of prokaryotes associated with sympatric sponge species of southwestern Atlantic coast

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recommendations! Published in 2021 at "Scientific Reports"

DOI: 10.1038/s41598-021-88288-3

Abstract: Prokaryotes contribute to the health of marine sponges. However, there is lack of data on the assembly rules of sponge-associated prokaryotic communities, especially for those inhabiting biodiversity hotspots, such as ecoregions between tropical and warm… read more here.

Keywords: sponge; brazilian sponge; functional prediction; southwestern atlantic ... See more keywords

Functional prediction based on 16S rRNA metagenome data from bacterial microbiota associated with macroalgae from the Peruvian coast

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recommendations! Published in 2024 at "Scientific Reports"

DOI: 10.1038/s41598-024-69538-6

Abstract: Macroalgae are vital reservoirs for essential epibiotic microorganisms. Among these are growth-promoting bacteria that support the growth and healthy development of their host macroalgae, and these macroalgae can be utilized in agriculture as biostimulants, offering… read more here.

Keywords: bacterial microbiota; 16s rrna; functional prediction; macroalgae ... See more keywords

Hindgut microbiota profiling and functional prediction of sheep (Ovis aries) fed with different dietary calcium levels

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recommendations! Published in 2025 at "Scientific Reports"

DOI: 10.1038/s41598-025-11020-y

Abstract: Hindgut microbiota plays a crucial role in small ruminant health and productivity, with diet being a key influencing factor. This study aimed to investigate the hindgut microbiota profile and functional prediction in sheep fed with… read more here.

Keywords: functional prediction; calcium levels; dietary calcium; hindgut microbiota ... See more keywords

Functional Prediction of Biological Profile During Eutrophication in Marine Environment

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recommendations! Published in 2022 at "Bioinformatics and Biology Insights"

DOI: 10.1177/11779322211063993

Abstract: In the marine environment, coastal nutrient pollution and algal blooms are increasing in many coral reefs and surface waters around the world, leading to higher concentrations of dissolved organic carbon (DOC), nitrogen (N), phosphate (P),… read more here.

Keywords: functional prediction; biological profile; prediction biological; marine ... See more keywords

Identification and Functional Prediction of Poplar Root circRNAs Involved in Treatment With Different Forms of Nitrogen

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recommendations! Published in 2022 at "Frontiers in Plant Science"

DOI: 10.3389/fpls.2022.941380

Abstract: Circular RNAs (circRNAs) are a class of noncoding RNA molecules with ring structures formed by covalent bonds and are commonly present in organisms, playing an important regulatory role in plant growth and development. However, the… read more here.

Keywords: poplar root; identification functional; prediction poplar; forms nitrogen ... See more keywords

Functional Prediction of Microbial Communities in Sediment Microbial Fuel Cells

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recommendations! Published in 2023 at "Bioengineering"

DOI: 10.3390/bioengineering10020199

Abstract: Sediment microbial fuel cells (MFCs) were developed in which the complex substrates present in the sediment could be oxidized by microbes for electron production. In this study, the functional prediction of microbial communities of anode-associated… read more here.

Keywords: prediction microbial; functional prediction; microbial communities; sediment microbial ... See more keywords