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   Articles with "genbank" as a keyword



Data to knowledge in action: A longitudinal analysis of GenBank metadata

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recommendations! Published in 2020 at "Proceedings of the Association for Information Science and Technology"

DOI: 10.1002/pra2.253

Abstract: Studies typically use publication‐based authorship data to study the relationships between collaboration networks and knowledge diffusion. However, collaboration in research often starts long before publication with data production efforts. In this project we ask how… read more here.

Keywords: knowledge; data production; genbank; knowledge diffusion ... See more keywords

GenBank as a source to monitor and analyze Host-Microbiome data

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recommendations! Published in 2022 at "Bioinformatics"

DOI: 10.1093/bioinformatics/btac487

Abstract: MOTIVATION Microbiome datasets are often constrained by sequencing limitations. GenBank is the largest collection of publicly available DNA sequences, which is maintained by the National Center of Biotechnology Information (NCBI). The metadata of GenBank records… read more here.

Keywords: genbank; host microbiome; genbank source; microbiome data ... See more keywords

GenBank 2025 update.

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recommendations! Published in 2024 at "Nucleic acids research"

DOI: 10.1093/nar/gkae1114

Abstract: GenBank® (https://www.ncbi.nlm.nih.gov/genbank/) is a comprehensive, public data repository that contains 34 trillion base pairs from over 4.7 billion nucleotide sequences for 581 000 formally described species. Daily data exchange with the European Nucleotide Archive and… read more here.

Keywords: genbank 2025; genbank; japan; 2025 update ... See more keywords

First report of Curvularia intermedia Boedijn causing leaf blight disease on Microstegium vimineum in China.

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recommendations! Published in 2022 at "Plant disease"

DOI: 10.1094/pdis-10-21-2289-pdn

Abstract: Stiltgrass [Microstegium vimineum (Trin.) A. Camus], is an annual C4 grass of Asiatic origin whose native range includes India, Pakistan, Nepal, China, Korea, and Japan (Cole et al 2004). In China, it is mainly distributed… read more here.

Keywords: genbank; vimineum; microstegium vimineum; disease ... See more keywords

Boeremia exigua Causes Leaf Spot of Walnut Trees (Juglans regia) in China.

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recommendations! Published in 2021 at "Plant disease"

DOI: 10.1094/pdis-10-21-2304-pdn

Abstract: Walnuts are an important perennial nut crop widely cultivated in China, which are rich in protein, carbohydrate, renieratene, and other beneficial nutrients. China is the largest producer of walnuts in the world, with the largest… read more here.

Keywords: genbank accession; walnut trees; juglans regia; genbank ... See more keywords

First report of Tulip Virus X infecting tulip (Tulipa gesneriana) in Korea.

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recommendations! Published in 2022 at "Plant disease"

DOI: 10.1094/pdis-12-21-2762-pdn

Abstract: Tulip virus X (tulip virus X, TVX) is a member of the genus Potexvirus (family Alphaflexiviridae) and is a positive single-stranded RNA virus. TVX was described first in Scotland (Mowat 1982), followed by several countries… read more here.

Keywords: genbank; tvx; virus; first report ... See more keywords

GeneConnector: Unlocking the full potential of Genbank metadata

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recommendations! Published in 2024 at "IEEE Latin America Transactions"

DOI: 10.1109/tla.2024.10412034

Abstract: Genbank currently stands as one of the most significant global repositories of genetic information. However, despite its vast quantity and diversity of data, a considerable portion of the existing records suffer from disjointed and often… read more here.

Keywords: information; genbank; full potential; unlocking full ... See more keywords