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Published in 2025 at "Journal of Computational Biology"
DOI: 10.1089/cmb.2024.0843
Abstract: We introduce GenPhylo, a Python module that simulates nucleotide sequence data along a phylogeny avoiding the restriction of continuous-time Markov processes. GenPhylo uses directly a general Markov model and therefore naturally incorporates heterogeneity across lineages.…
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Keywords:
biology;
generating heterogeneous;
heterogeneous data;
gene trees ... See more keywords