Articles with "genome analysis" as a keyword



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Complete mitochondrial genome analysis and molecular phylogenetic implications of Kennelia xylinana (Lepidoptera: Tortricidae).

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Published in 2022 at "Archives of insect biochemistry and physiology"

DOI: 10.1002/arch.21912

Abstract: Kennelia is a small genus in Tortricidae that is distributed in the Oriental and Palaearctic regions, and its taxonomic position within the subfamily Olethreutinae is controversial. For a comprehensive understanding of the genus, we sequenced… read more here.

Keywords: complete mitochondrial; molecular phylogenetic; kennelia xylinana; analysis molecular ... See more keywords
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Complete genome sequencing and comparative genome analysis of the extremely halophilic archaea, Haloterrigena daqingensis.

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Published in 2021 at "Biotechnology and applied biochemistry"

DOI: 10.1002/bab.2220

Abstract: In the present study, we report the complete genome sequencing of Haloterrigena daqingensis type species. The genome of H. daqingensis JX313T consisted of a circular chromosome with three plasmids. The genome size and G+C content… read more here.

Keywords: daqingensis; haloterrigena daqingensis; genome sequencing; genome analysis ... See more keywords
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Critical points for an accurate human genome analysis

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Published in 2017 at "Human Mutation"

DOI: 10.1002/humu.23238

Abstract: Next‐generation sequencing is radically changing how DNA diagnostic laboratories operate. What started as a single‐gene profession is now developing into gene panel sequencing and whole‐exome and whole‐genome sequencing (WES/WGS) analyses. With further advances in sequencing… read more here.

Keywords: accurate human; human genome; genome analysis; points accurate ... See more keywords
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Betacoronaviruses genome analysis reveals evolution toward specific codons usage: Implications for SARS‐CoV‐2 mitigation strategies

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Published in 2021 at "Journal of Medical Virology"

DOI: 10.1002/jmv.27056

Abstract: Since the start of the coronavirus disease 2019 (COVID‐19) pandemic, the severe acute respiratory syndrome coronavirus 2 (SARS‐CoV‐2) has rapidly widespread worldwide becoming one of the major global public health issues of the last centuries.… read more here.

Keywords: analysis reveals; betacoronaviruses genome; analysis; codon usage ... See more keywords
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Assembly and comparative genome analysis of a Patagonian Aureobasidium pullulans isolate reveals unexpected intraspecific variation.

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Published in 2023 at "Yeast"

DOI: 10.1002/yea.3853

Abstract: Aureobasidium pullulans is a yeast-like fungus with remarkable phenotypic plasticity widely studied for its importance for the pharmaceutical and food industries. So far, genomic studies with strains from all over the world suggest they constitute… read more here.

Keywords: comparative genome; assembly comparative; aureobasidium; genome analysis ... See more keywords
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An Effective Preprocessing Method for High-Quality Pan-Genome Analysis of Bacillus subtilis and Escherichia coli.

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Published in 2022 at "Methods in molecular biology"

DOI: 10.1007/978-1-0716-1720-5_21

Abstract: Bacillus subtilis and Escherichia coli, as widely used microbial species, are of great significance in studying microbial community relationships, adaptive evolution in various niches, engineering cell factories that produce specific products, and designing genome reduction.… read more here.

Keywords: quality; pan genome; quality pan; high quality ... See more keywords
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Genome sequencing and comparative genome analysis of 6 hypervirulent Klebsiella pneumoniae strains isolated in China

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Published in 2021 at "Archives of Microbiology"

DOI: 10.1007/s00203-021-02263-0

Abstract: Hypervirulent Klebsiella pneumoniae (hvKP) has been increasingly reported over the past three decades and causes severe infections. To increase our understanding of hvKP at the genome level, genome sequencing and comparative genome analysis were performed… read more here.

Keywords: analysis; genome analysis; sequencing comparative; genome sequencing ... See more keywords
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Ciprofloxacin induced antibiotic resistance in Salmonella Typhimurium mutants and genome analysis.

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Published in 2021 at "Archives of microbiology"

DOI: 10.1007/s00203-021-02577-z

Abstract: Antibiotic resistance of Salmonella species is well reported. Ciprofloxacin is the frontline antibiotic for salmonellosis. The repeated exposure to ciprofloxacin leads to resistant strains. After 20 cycles of antibiotic exposure, resistant bacterial clones were evaluated.… read more here.

Keywords: ciprofloxacin; genome analysis; resistance; antibiotic resistance ... See more keywords
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Comparative genome analysis of Bacillus velezensis reveals a potential for degrading lignocellulosic biomass

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Published in 2018 at "3 Biotech"

DOI: 10.1007/s13205-018-1270-7

Abstract: Genomes of 24 sequenced Bacillus velezensis strains were characterized to identity shared and unique genes of lignocellulolytic enzymes and predict potential to degrade lignocellulose. All 24 strains had genes that encoded lignocellulolytic enzymes, with potential… read more here.

Keywords: velezensis; velezensis reveals; bacillus velezensis; genome analysis ... See more keywords
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Whole-genome analysis of giraffe supports four distinct species

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Published in 2021 at "Current Biology"

DOI: 10.1016/j.cub.2021.04.033

Abstract: Species is the fundamental taxonomic unit in biology and its delimitation has implications for conservation. In giraffe (Giraffa spp.), multiple taxonomic classifications have been proposed since the early 1900s.1 However, one species with nine subspecies… read more here.

Keywords: whole genome; analysis giraffe; genome analysis; biology ... See more keywords
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Comparative mitochondrial genome analysis of Grammodes geometrica and other noctuid insects reveals conserved mitochondrial genome organization and phylogeny.

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Published in 2019 at "International journal of biological macromolecules"

DOI: 10.1016/j.ijbiomac.2018.09.104

Abstract: The mitochondrial genome (mitogenome) plays an important role in revealing molecular evolution. In this study, the complete mitogenome of Grammodes geometrica (G. geometrica) (Lepidoptera: Erebidae) was sequenced and characterized. The nucleotide composition of the genome… read more here.

Keywords: insects; grammodes geometrica; genome analysis; mitochondrial genome ... See more keywords