Articles with "genome browser" as a keyword



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Variant Interpretation: UCSC Genome Browser Recommended Track Sets.

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Published in 2022 at "Human mutation"

DOI: 10.1002/humu.24335

Abstract: The UCSC Genome Browser has been an important tool for genomics and clinical genetics since the sequence of the human genome was first released in 2000. As it has grown in scope to display more… read more here.

Keywords: browser; genome browser; recommended track; interpretation ... See more keywords
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The Ensembl Genome Browser: Strategies for Accessing Eukaryotic Genome Data.

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Published in 2018 at "Methods in molecular biology"

DOI: 10.1007/978-1-4939-7737-6_6

Abstract: The Ensembl Genome Browser provides a wealth of freely available genomic data that can be accessed for many purposes by genetics, genomics, and molecular biology researchers. Herein we present two protocols for exploring different aspects… read more here.

Keywords: ensembl genome; genome browser; strategies accessing; browser strategies ... See more keywords
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The UCSC SARS-CoV-2 Genome Browser

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Published in 2020 at "Nature genetics"

DOI: 10.1038/s41588-020-0700-8

Abstract: The UCSC SARS-CoV-2 Genome Browser ( https://genome.ucsc.edu/covid19.html ) is an adaptation of our popular genome-browser visualization tool for this virus, containing many annotation tracks and new features, including conservation with similar viruses, immune epitopes, RT–PCR… read more here.

Keywords: ucsc sars; genome browser; cov genome; browser ... See more keywords
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Integrated Genome Browser App Store

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Published in 2022 at "Bioinformatics"

DOI: 10.1093/bioinformatics/btac109

Abstract: Abstract Summary Rapid progress in genome science requires equally rapid visualization software development so that researchers can better explore and understand novel datasets. To make developing new visualizations faster and easier, we previously re-factored the… read more here.

Keywords: store; integrated genome; app store; igb ... See more keywords
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The UCSC Genome Browser database: 2021 update

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Published in 2021 at "Nucleic Acids Research"

DOI: 10.1093/nar/gkaa1070

Abstract: Abstract For more than two decades, the UCSC Genome Browser database (https://genome.ucsc.edu) has provided high-quality genomics data visualization and genome annotations to the research community. As the field of genomics grows and more data become… read more here.

Keywords: browser database; genome browser; browser; ucsc genome ... See more keywords
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The UCSC Genome Browser database: 2022 update.

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Published in 2021 at "Nucleic acids research"

DOI: 10.1093/nar/gkab959

Abstract: The UCSC Genome Browser, https://genome.ucsc.edu, is a graphical viewer for exploring genome annotations. The website provides integrated tools for visualizing, comparing, analyzing, and sharing both publicly available and user-generated genomic datasets. Data highlights this year… read more here.

Keywords: genome browser; browser database; genome; database 2022 ... See more keywords
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The UCSC Genome Browser database: 2017 update

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Published in 2017 at "Nucleic Acids Research"

DOI: 10.1093/nar/gkw1134

Abstract: Since its 2001 debut, the University of California, Santa Cruz (UCSC) Genome Browser (http://genome.ucsc.edu/) team has provided continuous support to the international genomics and biomedical communities through a web-based, open source platform designed for the… read more here.

Keywords: genome browser; browser database; genome; ucsc genome ... See more keywords
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Tree House Explorer: A Novel Genome Browser for Phylogenomics

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Published in 2022 at "Molecular Biology and Evolution"

DOI: 10.1101/2022.01.03.474706

Abstract: Tree House Explorer (THEx) is a genome browser that integrates phylogenomic data and genomic annotations into a single interactive platform for combined analysis. THEx allows users to visualize genome-wide variation in evolutionary histories and genetic… read more here.

Keywords: house explorer; tree house; genome browser;