Articles with "genome characterization" as a keyword



Whole genome characterization of Trichophyton indotineae isolated in Singapore.

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Published in 2024 at "Medical mycology"

DOI: 10.1093/mmy/myae012

Abstract: Complete genome sequences from two Trichophyton indotineae isolates were obtained from a 23-year-old male presenting with tinea cruris after an overseas recreational water exposure and from a 53-year-old female patient with unknown travel history. Analysis… read more here.

Keywords: whole genome; indotineae; trichophyton indotineae; genome characterization ... See more keywords

Genome characterization and pathogenicity of two new Hyptis pectinata viruses transmitted by distinct insect vectors.

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Published in 2022 at "Phytopathology"

DOI: 10.1094/phyto-04-22-0130-r

Abstract: Two newly described viruses belonging to distinct families, Rhabdoviridae and Geminiviridae, were discovered co-infecting Hyptis pectinata from a tropical dry forest of Ecuador. The negative-sense RNA genome of the rhabdovirus, tentatively named Hyptis latent virus… read more here.

Keywords: hyptis; pathogenicity two; hyptis pectinata; hpgmv ... See more keywords

Genome characterization of influenza A and B viruses in New South Wales, Australia, in 2019: A retrospective study using high‐throughput whole genome sequencing

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Published in 2024 at "Influenza and Other Respiratory Viruses"

DOI: 10.1111/irv.13252

Abstract: During the 2019 severe influenza season, New South Wales (NSW) experienced the highest number of cases in Australia. This study retrospectively investigated the genetic characteristics of influenza viruses circulating in NSW in 2019 and identified… read more here.

Keywords: influenza; new south; south wales; genome characterization ... See more keywords

CalmBelt: Rapid SARS-CoV-2 Genome Characterization for Outbreak Tracking

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Published in 2021 at "Frontiers in Medicine"

DOI: 10.3389/fmed.2021.790662

Abstract: Background: The ongoing COVID-19 pandemic is a global health crisis caused by the spread of SARS-CoV-2. Establishing links between known cases is crucial for the containment of COVID-19. In the healthcare setting, the ability to… read more here.

Keywords: sars cov; outbreak tracking; characterization outbreak; genome characterization ... See more keywords

Bioprospecting of Ribosomally Synthesized and Post-translationally Modified Peptides Through Genome Characterization of a Novel Probiotic Lactiplantibacillus plantarum UTNGt21A Strain: A Promising Natural Antimicrobials Factory

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Published in 2022 at "Frontiers in Microbiology"

DOI: 10.3389/fmicb.2022.868025

Abstract: The present work describes the genome sequencing and characterization of a novel Lactiplantibacillus plantarum strain assigned UTNGt21A isolated from wild Solanum quitoense (L.) fruits. In silico analysis has led to identifying a wide range of… read more here.

Keywords: lactiplantibacillus plantarum; characterization; characterization novel; strain ... See more keywords
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Genome Characterization of Lactiplantibacillus plantarum Strain UTNGt2 Originated from Theobroma grandiflorum (White Cacao) of Ecuadorian Amazon: Antimicrobial Peptides from Safety to Potential Applications

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Published in 2021 at "Antibiotics"

DOI: 10.3390/antibiotics10040383

Abstract: The genome characterization of the Lactiplantibacillus plantarum strain UTNGt2, isolated from wild copoazu or white cacao (Theobroma grandiflorum), is described. A total of 31 contigs is assembled with a total length of 3,264,448 bases, with… read more here.

Keywords: genome characterization; characterization lactiplantibacillus; lactiplantibacillus plantarum; plantarum strain ... See more keywords

Genome Characterization of Stelechocarpus burahol (Blume) Hook.f. & Thomson “Kepel” and Exploration of Phytochemicals from Water and Ethanolic Extracts of Leaves and Fruits

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Published in 2025 at "Foods"

DOI: 10.3390/foods14203569

Abstract: Stelechocarpus burahol (kepel) is valued for its aromatic fruits and medicinal leaves, yet its genomic and phytochemical features remain poorly characterized. This study estimated the nuclear DNA content of kepel leaves at 3.96 pg per… read more here.

Keywords: ethanolic extracts; water; stelechocarpus burahol; genome characterization ... See more keywords

Discovery and Genome Characterization of Three New Rhabdoviruses Infecting Passiflora spp. in Brazil

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Published in 2025 at "Viruses"

DOI: 10.3390/v17050725

Abstract: This study aimed to explore the RNA viruses affecting Passiflora species in Brazil. Our results enhance the understanding of the viruses that infect Passiflora plants by identifying and characterizing three previously unrecognized viruses: Passiflora cytorhabdovirus… read more here.

Keywords: brazil; characterization three; discovery genome; new rhabdoviruses ... See more keywords