Genome composition and phylogeny of microbes predict their co-occurrence in the environment
Sign Up to like & getrecommendations! Published in 2017 at "PLoS Computational Biology"
DOI: 10.1371/journal.pcbi.1005366
Abstract: The genomic information of microbes is a major determinant of their phenotypic properties, yet it is largely unknown to what extent ecological associations between different species can be explained by their genome composition. To bridge… read more here.
Keywords: microbe microbe; composition; predict occurrence; genome composition ... See more keywords
The analysis of genome composition and codon bias reveals distinctive patterns between avian and mammalian circoviruses which suggest a potential recombinant origin for Porcine circovirus 3
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DOI: 10.1371/journal.pone.0199950
Abstract: Members of the genus Circovirus are host-specific viruses, which are totally dependent on cell machinery for their replication. Consequently, certain mimicry of the host genome features is expected to maximize cellular replicative system exploitation and… read more here.
Keywords: codon bias; composition; composition codon; mammalian circoviruses ... See more keywords
On Estimation of Genome Composition in Genetically Admixed Individuals Using Constrained Genomic Regression
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DOI: 10.3389/fgene.2018.00185
Abstract: Quantifying the population stratification in genotype samples has become a standard procedure for data manipulation before conducting genome wide association studies, as well as for tracing patterns of migration in humans and animals, and for… read more here.
Keywords: estimation genome; founder; genetically admixed; composition genetically ... See more keywords