MOET: a web-based gene set enrichment tool at the Rat Genome Database for multiontology and multispecies analyses
Sign Up to like & getrecommendations! Published in 2022 at "Genetics"
DOI: 10.1093/genetics/iyac005
Abstract: Abstract Biological interpretation of a large amount of gene or protein data is complex. Ontology analysis tools are imperative in finding functional similarities through overrepresentation or enrichment of terms associated with the input gene or… read more here.
Keywords: genome database; ontology; enrichment tool; gene ... See more keywords
Saccharomyces genome database update: server architecture, pan-genome nomenclature, and external resources
Sign Up to like & getrecommendations! Published in 2023 at "Genetics"
DOI: 10.1093/genetics/iyac191
Abstract: Abstract As one of the first model organism knowledgebases, Saccharomyces Genome Database (SGD) has been supporting the scientific research community since 1993. As technologies and research evolve, so does SGD: from updates in software architecture,… read more here.
Keywords: genome database; saccharomyces genome; database update; pan genome ... See more keywords
Rare Disease Research Resources at the Rat Genome Database.
Sign Up to like & getrecommendations! Published in 2023 at "Genetics"
DOI: 10.1093/genetics/iyad078
Abstract: Rare diseases individually affect relatively few people, but as a group they impact considerable numbers of people. The Rat Genome Database (RGD; https://rgd.mcw.edu) is a knowledgebase that offers resources for rare disease research. This includes… read more here.
Keywords: rare disease; genome database; disease research; research ... See more keywords
Bovine Genome Database: new curated collection of selective sweeps in bovine populations across the world.
Sign Up to like & getrecommendations! Published in 2025 at "Nucleic acids research"
DOI: 10.1093/nar/gkaf1214
Abstract: Abstract Mapping genome-wide selective sweeps is of high relevance in cattle population genomics, having successfully identified thousands of genomic regions and candidate genes, with potential to reveal links to agriculturally important traits such as those… read more here.
Keywords: selective sweeps; genome database; new curated; database new ... See more keywords
Using online tools at the Bovine Genome Database to manually annotate genes in the new reference genome
Sign Up to like & getrecommendations! Published in 2020 at "Animal Genetics"
DOI: 10.1111/age.12962
Abstract: Summary With the availability of a new highly contiguous Bos taurus reference genome assembly (ARSâUCD1.2), it is the opportune time to upgrade the bovine gene set by seeking input from researchers. Furthermore, advances in graphical… read more here.
Keywords: bovine genome; reference genome; manual gene; annotation ... See more keywords
The Rhododendron Plant Genome Database (RPGD): a comprehensive online omics database for Rhododendron
Sign Up to like & getrecommendations! Published in 2021 at "BMC Genomics"
DOI: 10.1186/s12864-021-07704-0
Abstract: Background The genus Rhododendron L . has been widely cultivated for hundreds of years around the world. Members of this genus are known for great ornamental and medicinal value. Owing to advances in sequencing technology,… read more here.
Keywords: rpgd; rhododendron plant; plant genome; database ... See more keywords
Asteraceae genome database: a comprehensive platform for Asteraceae genomics
Sign Up to like & getrecommendations! Published in 2024 at "Frontiers in Plant Science"
DOI: 10.3389/fpls.2024.1445365
Abstract: Asteraceae, the largest family of angiosperms, has attracted widespread attention for its exceptional medicinal, horticultural, and ornamental value. However, researches on Asteraceae plants face challenges due to their intricate genetic background. With the continuous advancement… read more here.
Keywords: genome database; asteraceae genome; asteraceae genomics; asteraceae ... See more keywords