Complete sequences of Schizosaccharomyces pombe subtelomeres reveal multiple patterns of genome variation
Sign Up to like & getrecommendations! Published in 2021 at "Nature Communications"
DOI: 10.1038/s41467-020-20595-1
Abstract: Genome sequences have been determined for many model organisms; however, repetitive regions such as centromeres, telomeres, and subtelomeres have not yet been sequenced completely. Here, we report the complete sequences of subtelomeric homologous (SH) regions… read more here.
Keywords: complete sequences; variation; genome variation; schizosaccharomyces pombe ... See more keywords
Genome Variation Map: a worldwide collection of genome variations across multiple species
Sign Up to like & getrecommendations! Published in 2021 at "Nucleic Acids Research"
DOI: 10.1093/nar/gkaa1005
Abstract: Abstract The Genome Variation Map (GVM; http://bigd.big.ac.cn/gvm/) is a public data repository of genome variations. It aims to collect and integrate genome variations for a wide range of species, accepts submissions of different variation types… read more here.
Keywords: variation; genome variation; genome variations; gvm ... See more keywords
CMDB: the comprehensive population genome variation database of China
Sign Up to like & getrecommendations! Published in 2022 at "Nucleic Acids Research"
DOI: 10.1093/nar/gkac638
Abstract: Abstract A high-quality genome variation database derived from a large-scale population is one of the most important infrastructures for genomics, clinical and translational medicine research. Here, we developed the Chinese Millionome Database (CMDB), a database… read more here.
Keywords: database; genome variation; population genome; variation database ... See more keywords
Chloroplast genome variation and phylogenetic relationships of Atractylodes species
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DOI: 10.1186/s12864-021-07394-8
Abstract: Background Atractylodes DC is the basic original plant of the widely used herbal medicines “Baizhu” and “Cangzhu” and an endemic genus in East Asia. Species within the genus have minor morphological differences, and the universal… read more here.
Keywords: chloroplast genomes; genome variation; atractylodes species; phylogenetic relationships ... See more keywords
An open dataset of Plasmodium vivax genome variation in 1,895 worldwide samples
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DOI: 10.12688/wellcomeopenres.17795.1
Abstract: This report describes the MalariaGEN Pv4 dataset, a new release of curated genome variation data on 1,895 samples of Plasmodium vivax collected at 88 worldwide locations between 2001 and 2017. It includes 1,370 new samples… read more here.
Keywords: open dataset; variation; plasmodium vivax; genome variation ... See more keywords
Intrahost Monkeypox Virus Genome Variation in Patient with Early Infection, Finland, 2022
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DOI: 10.3201/eid2903.221388
Abstract: Monkeypox virus was imported into Finland during late May–early June 2022. Intrahost viral genome variation in a sample from 1 patient comprised a major variant with 3 lineage B.1.3–specific mutations and a minor variant with… read more here.
Keywords: finland; infection; genome variation; monkeypox virus ... See more keywords
Variation in synonymous evolutionary rates in the SARS-CoV-2 genome
Sign Up to like & getrecommendations! Published in 2023 at "Frontiers in Microbiology"
DOI: 10.3389/fmicb.2023.1136386
Abstract: Introduction Coronavirus disease 2019 is an infectious disease caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Influential variants and mutants of this virus continue to emerge, and more effective virus-related information is urgently required… read more here.
Keywords: cov genome; variation synonymous; genome variation; synonymous evolutionary ... See more keywords
Examining the Association between Mitochondrial Genome Variation and Coronary Artery Disease
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DOI: 10.3390/genes13030516
Abstract: Background: Large-scale genome-wide association studies have identified hundreds of single-nucleotide variants (SNVs) significantly associated with coronary artery disease (CAD). However, collectively, these explain G (ND5), found more frequently in cases (OR=1.05), potentially related to reduced… read more here.
Keywords: cad; disease; artery disease; genome variation ... See more keywords