Combining Genomic, Phenotypic and Sanger Sequencing Data to Elucidate the Phylogeny of the Two-Clawed Spiders (Dionycha).
Sign Up to like & getrecommendations! Published in 2021 at "Molecular phylogenetics and evolution"
DOI: 10.1016/j.ympev.2021.107327
Abstract: The importance of morphology in the phylogenomic era has recently gained attention, but relatively few studies have combined both types of information when inferring phylogenetic relationships. Sanger sequencing legacy data can also be important for… read more here.
Keywords: sequencing data; genomic phenotypic; phenotypic sanger; combining genomic ... See more keywords
Genomic and phenotypic analysis of Vavilov’s historic landraces reveals the impact of environment and genomic islands of agronomic traits
Sign Up to like & getrecommendations! Published in 2017 at "Scientific Reports"
DOI: 10.1038/s41598-017-05087-5
Abstract: The Vavilov Institute of Plant Genetic Resources (VIR), in St. Petersburg, Russia, houses a unique genebank, with historical collections of landraces. When they were collected, the geographical distribution and genetic diversity of most crops closely… read more here.
Keywords: phenotypic; historic landraces; genomic phenotypic; phenotypic analysis ... See more keywords
Beacon v2 Reference Implementation: a toolkit to enable federated sharing of genomic and phenotypic data
Sign Up to like & getrecommendations! Published in 2022 at "Bioinformatics"
DOI: 10.1093/bioinformatics/btac568
Abstract: SUMMARY Beacon v2 is an API specification established by the Global Alliance for Genomics and Health initiative (GA4GH) that defines a standard for federated discovery of genomic and phenotypic data. Here we present the Beacon… read more here.
Keywords: beacon reference; beacon; phenotypic data; genomic phenotypic ... See more keywords
Contrasting genomic and phenotypic outcomes of hybridization between pairs of mimetic butterfly taxa across a suture zone
Sign Up to like & getrecommendations! Published in 2020 at "Molecular Ecology"
DOI: 10.1111/mec.15403
Abstract: Hybrid zones, whereby divergent lineages come into contact and eventually hybridize, can provide insights on the mechanisms involved in population differentiation and reproductive isolation, and ultimately speciation. Suture zones offer the opportunity to compare these… read more here.
Keywords: suture; wing colour; genomic phenotypic; mimetic butterfly ... See more keywords
Genomic and Phenotypic Comparisons Reveal Distinct Variants of Wolbachia Strain wAlbB
Sign Up to like & getrecommendations! Published in 2022 at "Applied and Environmental Microbiology"
DOI: 10.1128/aem.01412-22
Abstract: Dengue is a viral disease transmitted by Aedes mosquitoes that threatens around half of the world population. Recent advances in dengue control involve the introduction of Wolbachia bacterial symbionts with antiviral properties into mosquito populations,… read more here.
Keywords: wolbachia strain; disease; variants wolbachia; strain ... See more keywords
Genomic and Phenotypic Insights for Toxigenic Clinical Vibrio cholerae O141
Sign Up to like & getrecommendations! Published in 2022 at "Emerging Infectious Diseases"
DOI: 10.3201/eid2803.210715
Abstract: Vibrio cholerae remains a major public health threat worldwide, causing millions of cholera cases each year. Although much is known about the evolution and pathogenicity of the O1/O139 serogroups of V. cholerae, information is lacking… read more here.
Keywords: phenotypic insights; cholerae; vibrio cholerae; cholerae o141 ... See more keywords
Genomic and Phenotypic Characterization of Chloracidobacterium Isolates Provides Evidence for Multiple Species
Sign Up to like & getrecommendations! Published in 2021 at "Frontiers in Microbiology"
DOI: 10.3389/fmicb.2021.704168
Abstract: Chloracidobacterium is the first and until now the sole genus in the phylum Acidobacteriota (formerly Acidobacteria) whose members perform chlorophyll-dependent phototrophy (i.e., chlorophototrophy). An axenic isolate of Chloracidobacterium thermophilum (strain BT) was previously obtained by… read more here.
Keywords: chloracidobacterium isolates; phenotypic characterization; chloracidobacterium; isolates provides ... See more keywords
Genomic and Phenotypic Characterization of Cutibacterium acnes Bacteriophages Isolated from Acne Patients
Sign Up to like & getrecommendations! Published in 2022 at "Antibiotics"
DOI: 10.3390/antibiotics11081041
Abstract: Cutibacterium acnes is a pathogen that can cause acne vulgaris, sarcoidosis, endodontic lesions, eye infections, prosthetic joint infections, and prostate cancer. Recently, bacteriophage (phage) therapy has been developed as an alternative to antibiotics. In this… read more here.
Keywords: phenotypic characterization; cutibacterium acnes; genomic phenotypic; cutibacterium ... See more keywords
Insights into the Genomic and Phenotypic Landscape of the Oleaginous Yeast Yarrowia lipolytica
Sign Up to like & getrecommendations! Published in 2023 at "Journal of Fungi"
DOI: 10.3390/jof9010076
Abstract: Although Yarrowia lipolytica is a model yeast for the study of lipid metabolism, its diversity is poorly known, as studies generally consider only a few standard laboratory strains. To extend our knowledge of this biotechnological… read more here.
Keywords: yarrowia lipolytica; diversity; yeast; genomic phenotypic ... See more keywords
Genomic and phenotypic evolution of Escherichia coli in a novel citrate-only resource environment
Sign Up to like & getrecommendations! Published in 2020 at "eLife"
DOI: 10.7554/elife.55414
Abstract: Evolutionary innovations allow populations to colonize new ecological niches. We previously reported that aerobic growth on citrate (Cit+) evolved in an Escherichia coli population during adaptation to a minimal glucose medium containing citrate (DM25). Cit+… read more here.
Keywords: coli; citrate; genomic phenotypic; phenotypic evolution ... See more keywords