Genomic resources and comparative analyses of two economical penaeid shrimp species, Marsupenaeus japonicus and Penaeus monodon
Sign Up to like & getrecommendations! Published in 2017 at "Marine Genomics"
DOI: 10.1016/j.margen.2017.12.006
Abstract: Abstract Penaeid shrimps are among the most economically important crustaceans, which provide an important global food source. These species exhibit complex body plans and novelties, such as segments and appendages, which render them interesting organisms… read more here.
Keywords: shrimp species; species marsupenaeus; penaeid shrimp; japonicus ... See more keywords
Improved genomic resources for the black tiger prawn (Penaeus monodon).
Sign Up to like & getrecommendations! Published in 2020 at "Marine genomics"
DOI: 10.1016/j.margen.2020.100751
Abstract: World production of farmed crustaceans was 7.8 million tons in 2016. While only making up approximately 10% of world aquaculture production, crustaceans are generally high-value species and can earn significant export income for producing countries.… read more here.
Keywords: monodon genome; genome assembly; tiger prawn; genome ... See more keywords
Fast and global detection of periodic sequence repeats in large genomic resources
Sign Up to like & getrecommendations! Published in 2019 at "Nucleic Acids Research"
DOI: 10.1093/nar/gky890
Abstract: Abstract Periodically repeating DNA and protein elements are involved in various important biological events including genomic evolution, gene regulation, protein complex formation, and immunity. Notably, the currently used genome editing tools such as ZFNs, TALENs,… read more here.
Keywords: genome editing; large genomic; genomic resources; software ... See more keywords
Identifying homomorphic sex chromosomes from wild‐caught adults with limited genomic resources
Sign Up to like & getrecommendations! Published in 2017 at "Molecular Ecology Resources"
DOI: 10.1111/1755-0998.12624
Abstract: We demonstrate a genotyping‐by‐sequencing approach to identify homomorphic sex chromosomes and their homolog in a distantly related reference genome, based on noninvasive sampling of wild‐caught individuals, in the moor frog Rana arvalis. Double‐digest RADseq libraries… read more here.
Keywords: homomorphic sex; resources identifying; sex chromosomes; sex ... See more keywords
Metatranscriptomics yields new genomic resources and sensitive detection of infections for diverse blood parasites.
Sign Up to like & getrecommendations! Published in 2019 at "Molecular ecology resources"
DOI: 10.1111/1755-0998.13091
Abstract: Metatranscriptomics is a powerful method for studying the composition and function of complex microbial communities. The application of metatranscriptomics to multi-species parasite infections is of particular interest, as research on parasite evolution and diversification has… read more here.
Keywords: blood parasites; yields new; new genomic; blood ... See more keywords
Genomic Resources for Salminus brasiliensis
Sign Up to like & getrecommendations! Published in 2022 at "Frontiers in Genetics"
DOI: 10.3389/fgene.2022.855718
Abstract: The Neotropical region bears the most diverse freshwater fish fauna on the planet and is the stage for dramatic conservation struggles. Initiatives aiming for conservation of a single emblematic fish, a flagship species, to which… read more here.
Keywords: genomic resources; resources salminus; flagship; brasiliensis ... See more keywords
Development of Chloroplast Genomic Resources for Oryza Species Discrimination
Sign Up to like & getrecommendations! Published in 2017 at "Frontiers in Plant Science"
DOI: 10.3389/fpls.2017.01854
Abstract: Rice is the most important crop in the world as the staple food for over half of the population. The wild species of Oryza represent an enormous gene pool for genetic improvement of rice cultivars.… read more here.
Keywords: chloroplast genomes; rice; chloroplast genomic; oryza species ... See more keywords
Finger millet RNA-seq reveals differential gene expression associated with tolerance to aluminum toxicity and provides novel genomic resources
Sign Up to like & getrecommendations! Published in 2022 at "Frontiers in Plant Science"
DOI: 10.3389/fpls.2022.1068383
Abstract: Eleusine coracana, finger millet, is a multipurpose crop cultivated in arid and semi-arid regions of Africa and Asia. RNA sequencing (RNA-seq) was used in this study to obtain valuable genomic resources and identify genes differentially… read more here.
Keywords: finger millet; millet rna; rna seq; genomic resources ... See more keywords
RNA-Seq Provides Novel Genomic Resources for Noug (Guizotia abyssinica) and Reveals Microsatellite Frequency and Distribution in Its Transcriptome
Sign Up to like & getrecommendations! Published in 2022 at "Frontiers in Plant Science"
DOI: 10.3389/fpls.2022.882136
Abstract: Genomic resources and tools are essential for improving crops and conserving their genetic resources. Guizotia abyssinica (noug), an outcrossing edible oilseed crop, has highly limited genomic resources. Hence, RNA-Seq based transcriptome sequencing of 30 noug… read more here.
Keywords: rna seq; genomic resources; novel genomic; guizotia abyssinica ... See more keywords
Genetic and Genomic Resources for Soybean Breeding Research
Sign Up to like & getrecommendations! Published in 2022 at "Plants"
DOI: 10.3390/plants11091181
Abstract: Soybean (Glycine max) is a legume species of significant economic and nutritional value. The yield of soybean continues to increase with the breeding of improved varieties, and this is likely to continue with the application… read more here.
Keywords: soybean breeding; genomic resources; genetic genomic; resources soybean ... See more keywords