Articles with "genomic surveillance" as a keyword



Photo by tobiastu from unsplash

Genomic surveillance of the Lambda SARS‐CoV‐2 variant in a global phylogenetic context

Sign Up to like & get
recommendations!
Published in 2022 at "Journal of Medical Virology"

DOI: 10.1002/jmv.27889

Abstract: The massive sequencing of severe acute respiratory syndrome coronavirus 2 (SARS‐CoV‐2) and global genomic surveillance strategies allowed the detection of many variants of concern and interest. The variant of interest Lambda (C.37), which originated in… read more here.

Keywords: lambda; spike mutations; surveillance lambda; genomic surveillance ... See more keywords
Photo by lamoune from unsplash

Approaching COVID‐19 with epidemiological genomic surveillance and the sustainability of biodiversity informatics in Africa

Sign Up to like & get
recommendations!
Published in 2022 at "Journal of Medical Virology"

DOI: 10.1002/jmv.28308

Abstract: COVID‐19 is an acute respiratory illness caused by Severe Acute Respiratory Syndrome‐Coronavirus 2 (SARS‐CoV‐2). The first case was reported in Africa on February 14, 2020 and has surged to 11 million as of July 2022,… read more here.

Keywords: approaching covid; biodiversity informatics; genomic surveillance; surveillance ... See more keywords
Photo by nci from unsplash

SARS-CoV-2 genomic surveillance identifies naturally occurring truncation of ORF7a that limits immune suppression

Sign Up to like & get
recommendations!
Published in 2021 at "Cell Reports"

DOI: 10.1016/j.celrep.2021.109197

Abstract: Over 950,000 whole genome sequences of SARS-CoV-2 have been determined for viruses isolated from around the world. These sequences have been critical for understanding the spread and evolution of SARS-CoV-2. Using global phylogenomics, we show… read more here.

Keywords: genomic surveillance; surveillance identifies; cov genomic; sars cov ... See more keywords
Photo from wikipedia

Crack down on genomic surveillance

Sign Up to like & get
recommendations!
Published in 2019 at "Nature"

DOI: 10.1038/d41586-019-03687-x

Abstract: Corporations selling DNA-profiling technology are aiding human-rights abuses. Governments, legislators, researchers, reviewers and publishers must act. Corporations selling DNA-profiling technology are aiding human-rights abuses. Governments, legislators, researchers, reviewers and publishers must act. Police patrolling in… read more here.

Keywords: crack genomic; genomic surveillance;
Photo from wikipedia

Genomic surveillance of COVID-19 cases in Beijing

Sign Up to like & get
recommendations!
Published in 2020 at "Nature Communications"

DOI: 10.1038/s41467-020-19345-0

Abstract: The spread of SARS-CoV-2 in Beijing before May, 2020 resulted from transmission following both domestic and global importation of cases. Here we present genomic surveillance data on 102 imported cases, which account for 17.2% of… read more here.

Keywords: cases beijing; genomic surveillance; covid cases; transmission ... See more keywords
Photo from wikipedia

Multiple expansions of globally uncommon SARS-CoV-2 lineages in Nigeria

Sign Up to like & get
recommendations!
Published in 2022 at "Nature Communications"

DOI: 10.1038/s41467-022-28317-5

Abstract: Disparities in SARS-CoV-2 genomic surveillance have limited our understanding of the viral population dynamics and may delay identification of globally important variants. Despite being the most populated country in Africa, Nigeria has remained critically under… read more here.

Keywords: genomic surveillance; sars cov; globally uncommon; lineages nigeria ... See more keywords
Photo from wikipedia

Global landscape of SARS-CoV-2 genomic surveillance and data sharing.

Sign Up to like & get
recommendations!
Published in 2022 at "Nature genetics"

DOI: 10.1038/s41588-022-01033-y

Abstract: Genomic surveillance has shaped our understanding of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants. We performed a global landscape analysis on SARS-CoV-2 genomic surveillance and genomic data using a collection of country-specific data. Here,… read more here.

Keywords: sars cov; cov genomic; global landscape; genomic surveillance ... See more keywords
Photo from wikipedia

Genomic Surveillance of Salmonella Paratyphi A: Neglected No More?

Sign Up to like & get
recommendations!
Published in 2023 at "Open Forum Infectious Diseases"

DOI: 10.1093/ofid/ofad077

Abstract: Abstract Salmonella enterica serovar Paratyphi A, the causative agent of paratyphoid fever, is a neglected tropical disease with a high burden and mortality in low- and middle-income countries. Limited information is available regarding its genomic… read more here.

Keywords: paratyphi neglected; salmonella paratyphi; surveillance salmonella; genomic surveillance ... See more keywords
Photo from wikipedia

Genomic surveillance of Salmonella spp. in the Philippines during 2013–2014

Sign Up to like & get
recommendations!
Published in 2022 at "Transactions of the Royal Society of Tropical Medicine and Hygiene"

DOI: 10.1093/trstmh/trac080

Abstract: Abstract Background Increasing antimicrobial resistance (AMR) in Salmonella has been observed in the Philippines. We aimed to characterise the population and AMR mechanisms of Salmonella with whole genome sequencing (WGS) and compare it with laboratory… read more here.

Keywords: surveillance; surveillance salmonella; genomic surveillance; salmonella ... See more keywords
Photo from wikipedia

Dissemination of carbapenemase-producing Enterobacterales in Ireland from 2012 to 2017: a retrospective genomic surveillance study

Sign Up to like & get
recommendations!
Published in 2023 at "Microbial Genomics"

DOI: 10.1099/mgen.0.000924

Abstract: The spread of carbapenemase-producing Enterobacterales (CPE) is of major public health concern. The transmission dynamics of CPE in hospitals, particularly at the national level, are not well understood. Here, we describe a retrospective nationwide genomic… read more here.

Keywords: carbapenemase producing; producing enterobacterales; genomic surveillance; 2012 2017 ... See more keywords
Photo from wikipedia

Genomic surveillance of SARS-CoV-2 during the first year of the pandemic in the Bronx enabled clinical and epidemiological inference

Sign Up to like & get
recommendations!
Published in 2022 at "Cold Spring Harbor Molecular Case Studies"

DOI: 10.1101/mcs.a006211

Abstract: The Bronx was an early epicenter of the COVID-19 pandemic in the United States. We conducted temporal genomic surveillance of 104 SARS-CoV-2 genomes across the Bronx from March to October 2020. Although the local structure… read more here.

Keywords: genomic surveillance; clinical epidemiological; surveillance sars; bronx ... See more keywords