Articles with "genotyping assay" as a keyword



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The development of a novel SNP genotyping assay to differentiate cacao clones

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Published in 2019 at "Scientific Reports"

DOI: 10.1038/s41598-019-45884-8

Abstract: In this study, a double-mismatch allele-specific (DMAS) qPCR SNP genotyping method has been designed, tested and validated specifically for cacao, using 65 well annotated international cacao reference accessions retrieved from the Center for Forestry Research… read more here.

Keywords: genotyping assay; snp genotyping; novel snp; development novel ... See more keywords
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Visualised genotyping assay with oral swabs in a closed tube by nested invasive reaction assisted with gold nanoparticle probes

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Published in 2023 at "IET Nanobiotechnology"

DOI: 10.1049/nbt2.12123

Abstract: Abstract Single nucleotide polymorphism (SNP) typing is crucial for drug dosage and disease progression. Therefore, a simple and convenient genotyping assay is essential for personalised medicine. Herein, we developed a non‐invasive, closed‐tube, and visualised method… read more here.

Keywords: invasive reaction; medicine; closed tube; genotyping assay ... See more keywords
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Detection of Circulating HPV16 DNA as a Biomarker for Cervical Cancer by a Bead-Based HPV Genotyping Assay

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Published in 2022 at "Microbiology Spectrum"

DOI: 10.1128/spectrum.01480-21

Abstract: The validity of HPV ctDNA as a marker of HPV-driven cancers has been previously reported. Herein we validated an alternative to ddPCR for HPV16 ctDNA detection, using a bead-based HPV genotyping assay that offers the… read more here.

Keywords: hpv16 ctdna; detection; hpv; genotyping assay ... See more keywords
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Evaluation of the cobas® GT hepatitis C virus genotyping assay in G1-6 viruses including low viral loads and LiPA failures

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Published in 2018 at "PLoS ONE"

DOI: 10.1371/journal.pone.0194396

Abstract: Direct-acting antiviral (DAA) drug performances depend on the viral genotype. So international recommendations give typing of the virus a prerequisite for treatment choice and patient management. Commercially available HCV genotyping kits are scarce and this… read more here.

Keywords: lipa failures; genotyping assay; low viral; genotype ... See more keywords
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Development of a Single-nucleotide Polymorphism Genotyping Assay for the Rapid Detection of Vancomycin-intermediate Resistance in Staphylococcus aureus Epidemic Lineage ST5

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Published in 2023 at "Annals of Laboratory Medicine"

DOI: 10.3343/alm.2023.43.4.355

Abstract: Background Vancomycin is a treatment option for patients with severe methicillin-resistant Staphylococcus aureus (MRSA) infection. Unfortunately, reduced susceptibility to vancomycin in S. aureus is becoming increasingly common. We developed a method for the rapid and… read more here.

Keywords: vancomycin; genotyping assay; staphylococcus aureus; vancomycin intermediate ... See more keywords