Quantifying dominant bacterial genera detected in metagenomic data from fish eggs and larvae using genus‐specific primers
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DOI: 10.1002/mbo3.1274
Abstract: The goal of this study was to design genus‐specific primers for rapid evaluation of the most abundant bacterial genera identified using amplicon‐based sequencing of the 16S rRNA gene in fish‐related samples and surrounding water. Efficient… read more here.
Keywords: bacterial genera; specific primers; 16s rrna; genus specific ... See more keywords
Genus-specific pattern of intrinsically disordered central regions in the nucleocapsid protein of coronaviruses
Sign Up to like & getrecommendations! Published in 2020 at "Computational and Structural Biotechnology Journal"
DOI: 10.1016/j.csbj.2020.07.005
Abstract: Abstract The nucleocapsid (N) protein is conserved in all four genera of the coronaviruses, namely alpha, beta, gamma, and delta, and is essential for genome functionality. Bioinformatic analysis of coronaviral N sequences revealed two intrinsically… read more here.
Keywords: pattern intrinsically; disordered central; specific pattern; genus specific ... See more keywords
Enrichment of Viral Nucleic Acids by Solution Hybrid Selection with Genus Specific Oligonucleotides
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DOI: 10.1038/s41598-017-10342-w
Abstract: Despite recent advances, our knowledge of potential and rare human pathogens is far from exhaustive. Current molecular diagnostic tools mainly rely on the specific amplification of marker sequences and may overlook infections caused by unknown… read more here.
Keywords: enrichment viral; nucleic acids; genus; genus specific ... See more keywords
Comparative genomics reveals a core gene toolbox for lifestyle transitions in Hypocreales fungi
Sign Up to like & getrecommendations! Published in 2021 at "Environmental Microbiology"
DOI: 10.1111/1462-2920.15554
Abstract: Summary Fungi have evolved diverse lifestyles and adopted pivotal new roles in both natural ecosystems and human environments. However, the molecular mechanisms underlying their adaptation to new lifestyles are obscure. Here, we hypothesize that genes… read more here.
Keywords: comparative genomics; lifestyle transitions; genus specific; specific genes ... See more keywords
Evaluation of the Bacterial Diversity in the Human Tongue Coating Based on Genus-Specific Primers for 16S rRNA Sequencing
Sign Up to like & getrecommendations! Published in 2017 at "BioMed Research International"
DOI: 10.1155/2017/8184160
Abstract: The characteristics of tongue coating are very important symbols for disease diagnosis in traditional Chinese medicine (TCM) theory. As a habitat of oral microbiota, bacteria on the tongue dorsum have been proved to be the… read more here.
Keywords: tongue coating; 16s rrna; based genus; genus specific ... See more keywords
Development of a genus-specific next generation sequencing approach for sensitive and quantitative determination of the Legionella microbiome in freshwater systems
Sign Up to like & getrecommendations! Published in 2017 at "BMC Microbiology"
DOI: 10.1186/s12866-017-0987-5
Abstract: BackgroundNext Generation Sequencing (NGS) has revolutionized the analysis of natural and man-made microbial communities by using universal primers for bacteria in a PCR based approach targeting the 16S rRNA gene. In our study we narrowed… read more here.
Keywords: ngs approach; genus specific; approach; legionella ... See more keywords