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Published in 2019 at "Journal of Molecular Modeling"
DOI: 10.1007/s00894-019-3987-6
Abstract: Creating input files to atomistic simulations and quantum chemical calculations in the CP2K software package can be a challenge. Here, we present a new graphical user interface to reduce the complexity of the work needed…
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Keywords:
graphical user;
user interface;
input files;
input ... See more keywords
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1
Published in 2021 at "International Journal of Systems Assurance Engineering and Management"
DOI: 10.1007/s13198-021-01096-w
Abstract: An electroencephalogram (EEG) based brain-computer interface (BCI) enables the control of some external activity directly from the brain, without any physical movement/overt action. The external activity can be the cursor control of a computer or…
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Keywords:
graphical user;
user interface;
based graphical;
interface ... See more keywords
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1
Published in 2019 at "Chemometrics and Intelligent Laboratory Systems"
DOI: 10.1016/j.chemolab.2019.03.001
Abstract: Abstract Fluorescence has been widely employed for the characterization of organic matter. In particular, excitation emission matrixes (EEM) provide important qualitative information on its composition. However, the application of this technique is limited by the…
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Keywords:
interface fluorimetry;
dreem toolbox;
graphical user;
experiments based ... See more keywords
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Published in 2020 at "Chemometrics and Intelligent Laboratory Systems"
DOI: 10.1016/j.chemolab.2019.103915
Abstract: Abstract Colourgrams GUI is a graphical user-friendly interface developed in order to facilitate the analysis of large datasets of RGB images through the colourgrams approach. Briefly, the colourgrams approach consists in converting a dataset of…
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Keywords:
graphical user;
analysis;
gui graphical;
user friendly ... See more keywords
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Published in 2019 at "Protein expression and purification"
DOI: 10.1016/j.pep.2019.03.018
Abstract: Optimization of coding sequences to maximize protein expression yield is often outsourced to external service providers during commercial gene synthesis and thus unfortunately remains a black box for many researchers. The presented software program "CodonWizard"…
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Keywords:
protein expression;
graphical user;
customizable codon;
optimization ... See more keywords
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1
Published in 2022 at "Bioinformatics"
DOI: 10.1093/bioinformatics/btab771
Abstract: SUMMARY Deep learning (DL) can significantly accelerate virtual screening of ultra-large chemical libraries, enabling the evaluation of billions of compounds at a fraction of the computational cost and time required by conventional docking. Here we…
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Keywords:
deep learning;
chemical libraries;
gui graphical;
large chemical ... See more keywords
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1
Published in 2022 at "Journal of Radiation Research"
DOI: 10.1093/jrr/rrac010
Abstract: Abstract The Monte Carlo (MC) method is a powerful tool for modeling nuclear radiation interaction with matter. A variety of MC software packages has been developed, especially for applications in radiation therapy. Most widely used…
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Keywords:
emitting radioisotopes;
therapy;
proton therapy;
graphical user ... See more keywords
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2
Published in 2022 at "Journal of Applied Crystallography"
DOI: 10.1107/s1600576722002758
Abstract: The design and usage of Scipion-ED, a graphical user interface program for processing and analysis of three-dimensional electron diffraction (3D ED)/microcrystal electron diffraction (MicroED) data, are presented. A study of the influence of data merging…
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Keywords:
scipion graphical;
graphical user;
processing analysis;
user interface ... See more keywords
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Published in 2020 at "Proceedings of the IEEE"
DOI: 10.1109/jproc.2020.2969687
Abstract: The graphical user interface (GUI) has become the prime means for interacting with computing systems. It leverages human perceptual and motor capabilities for elementary tasks such as command exploration and invocation, information search, and multitasking.…
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Keywords:
user interface;
optimization;
graphical user;
combinatorial optimization ... See more keywords
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Published in 2021 at "Molecular Ecology Resources"
DOI: 10.1111/1755-0998.13358
Abstract: DNA metabarcoding is increasingly used as a tool to assess biodiversity in research and environmental management. Powerful analysis software exists to process raw data. However, the translation of sequence read data into biological information and…
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Keywords:
graphical user;
user interface;
dna metabarcoding;
metabarcoding data ... See more keywords
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Published in 2018 at "PLoS ONE"
DOI: 10.1371/journal.pone.0204474
Abstract: Modern bioinformatics and computational biology are fields of study driven by the availability of effective software required for conducting appropriate research tasks. Apart from providing reliable and fast implementations of different data analysis algorithms, these…
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Keywords:
java;
user;
graphical user;
bioinformatics oriented ... See more keywords