Articles with "gtp" as a keyword



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Enhancement of toyocamycin production through increasing supply of precursor GTP in Streptomyces diastatochromogenes 1628.

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Published in 2022 at "Journal of basic microbiology"

DOI: 10.1002/jobm.202100622

Abstract: The nucleoside antibiotic toyocamycin (TM), which is produced by Streptomyces diastatochromogenes 1628, exhibits potent activity against a broad range of phytopathogenic fungi. TM was synthesized through a multi-step reaction, using guanosine triphosphate (GTP) as precursor.… read more here.

Keywords: precursor; gtp; production; toyocamycin ... See more keywords
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Oncogenic mutations on Rac1 affect global intrinsic dynamics underlying GTP and PAK1 binding.

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Published in 2021 at "Biophysical journal"

DOI: 10.1016/j.bpj.2021.01.016

Abstract: Rac1 is a small member of Rho GTPase family. One of the most important downstream effectors of Rac1 is a serine/threonine kinase, p21-activated kinase 1 (PAK1). Mutational activation of PAK1 by Rac1 has oncogenic signaling… read more here.

Keywords: rac1 pak1; pak1; gtp; intrinsic dynamics ... See more keywords
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In silico comparative analysis of KRAS mutations at codons 12 and 13: Structural modifications of P-Loop, switch I&II regions preventing GTP hydrolysis

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Published in 2022 at "Computers in biology and medicine"

DOI: 10.1016/j.compbiomed.2021.105110

Abstract: KRAS mutation is prevalent in around 30% of all cancers and is an undruggable molecular target. Of seven mutations at codon 12 and 13, only one, the G12C mutant is finally proven to be druggable,… read more here.

Keywords: silico comparative; comparative analysis; gtp; analysis kras ... See more keywords
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Factors underlying distressful and recurrent hallucinations, perceptual distortions, dissociations and impulses associated with playing video games

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Published in 2017 at "European Psychiatry"

DOI: 10.1016/j.eurpsy.2017.02.077

Abstract: Introduction Failures in cognitive and behavioural inhibition are the core of mental disorders, but they are also part of everyday life. Research on Game Transfer Phenomena (GTP) has shown that images, sounds and thoughts from… read more here.

Keywords: underlying distressful; several episodes; gtp; factors underlying ... See more keywords
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Molecular dynamics and docking reveal the potency of novel GTP derivatives against RNA dependent RNA polymerase of genotype 4a HCV.

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Published in 2019 at "Life sciences"

DOI: 10.1016/j.lfs.2019.116958

Abstract: AIM To work on Hepatitis C Virus (HCV), one of the major causes of liver cirrhosis and hepatocellular carcinoma, polymerase of genotype 4a that have no solved structures deposited in the protein data bank (PDB)… read more here.

Keywords: molecular dynamics; gtp; hcv; polymerase ... See more keywords
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Structure of an inactive conformation of GTP-bound RhoA GTPase.

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Published in 2021 at "Structure"

DOI: 10.1016/j.str.2020.12.015

Abstract: By using 31P NMR, we present evidence that the Rho family GTPase RhoA, similar to Ras GTPases, exists in an equilibrium of conformations when bound to GTP. High-resolution crystal structures of RhoA bound to the… read more here.

Keywords: bound rhoa; gtp bound; gtp; inactive conformation ... See more keywords
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Nanobody-Based Quantification of GTP-Bound RHO Conformation Reveals RHOA and RHOC Activation Independent from Their Total Expression in Breast Cancer.

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Published in 2021 at "Analytical chemistry"

DOI: 10.1021/acs.analchem.0c05137

Abstract: As key regulators of the actin cytoskeleton, RHO GTPase expression and/or activity are deregulated in tumorigenesis and metastatic progression. Nevertheless, the vast majority of experiments supporting this conclusion was conducted on cell lines but not… read more here.

Keywords: tumor samples; breast; gtp bound; gtp ... See more keywords
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Mutation-Induced Impacts on the Switch Transformations of the GDP- and GTP-Bound K-Ras: Insights from Multiple Replica Gaussian Accelerated Molecular Dynamics and Free Energy Analysis

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Published in 2021 at "Journal of chemical information and modeling"

DOI: 10.1021/acs.jcim.0c01470

Abstract: Mutations yield significant effect on the structural flexibility of two switch domains, SW1 and SW2, in K-Ras, which is considered as an important target of anticancer drug design. To unveil a molecular mechanism with regard… read more here.

Keywords: sw1 sw2; gaussian accelerated; gtp; gdp gtp ... See more keywords
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Alternative Approaches to Understand Microtubule Cap Morphology and Function

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Published in 2023 at "ACS Omega"

DOI: 10.1021/acsomega.2c06926

Abstract: Microtubules (MTs) are essential cellular machines built from concatenated αβ-tubulin heterodimers. They are responsible for two central and opposite functions from the dynamic point of view: scaffolding (static filaments) and force generation (dynamic MTs). These… read more here.

Keywords: understand microtubule; cap; gtp; alternative approaches ... See more keywords
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Regulation of local GTP availability controls RAC1 activity and cell invasion.

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Published in 2021 at "Nature communications"

DOI: 10.1038/s41467-021-26324-6

Abstract: Physiological changes in GTP levels in live cells have never been considered a regulatory step of RAC1 activation because intracellular GTP concentration (determined by chromatography or mass spectrometry) was shown to be substantially higher than… read more here.

Keywords: activity cell; rac1 activity; gtp levels; gtp ... See more keywords
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Nucleotide based covalent inhibitors of KRas can only be efficient in vivo if they bind reversibly with GTP-like affinity

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Published in 2017 at "Scientific Reports"

DOI: 10.1038/s41598-017-03973-6

Abstract: Simple reversible competitive inhibition of nucleotide binding of GTP to Ras family GTPases has long been recognized as an unlikely approach to manipulating the activity of such proteins for experimental or therapeutic purposes. This is… read more here.

Keywords: based covalent; nucleotide based; covalent inhibitors; affinity ... See more keywords