Articles with "guided design" as a keyword



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Computationā€Guided Design of a Stimulusā€Responsive Multienzyme Supramolecular Assembly

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Published in 2017 at "ChemBioChem"

DOI: 10.1002/cbic.201700425

Abstract: The construction of stimulus-responsive supramolecular complexes of metabolic pathway enzymes, inspired by natural multienzyme assemblies (metabolons), provides an attractive avenue for efficient and spatiotemporally controllable one-pot biotransformations. We have constructed a phosphorylation- and optically responsive… read more here.

Keywords: stimulus; guided design; computation guided; multienzyme ... See more keywords
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Structure-guided design of potent and permeable inhibitors of MERS coronavirus 3CL protease that utilize a piperidine moiety as a novel design element

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Published in 2018 at "European Journal of Medicinal Chemistry"

DOI: 10.1016/j.ejmech.2018.03.004

Abstract: Abstract There are currently no approved vaccines or small molecule therapeutics available for the prophylaxis or treatment of Middle East Respiratory Syndrome coronavirus (MERS-CoV) infections. MERS-CoV 3CL protease is essential for viral replication; consequently, it… read more here.

Keywords: guided design; structure guided; 3cl protease; mers cov ... See more keywords
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Hot-spot guided design of macrocyclic inhibitors of the LSD1-CoREST1 interaction

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Published in 2019 at "Tetrahedron"

DOI: 10.1016/j.tet.2019.130685

Abstract: Abstract New modalities such as cyclic peptides are attractive structures to inhibit challenging targets. The interaction between LSD1 and CoREST1 is required for histone demethylation and represents an attractive therapeutic target. The large interaction surface… read more here.

Keywords: guided design; lsd1 corest1; interaction; hot spot ... See more keywords
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Illuminating a Dark Kinase: Structure-Guided Design, Synthesis, and Evaluation of a Potent Nek1 Inhibitor and Its Effects on the Embryonic Zebrafish Pronephros.

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Published in 2022 at "Journal of medicinal chemistry"

DOI: 10.1021/acs.jmedchem.0c02118

Abstract: NIMA-related kinase 1 (Nek1) has lately garnered attention for its widespread function in ciliogenesis, apoptosis, and the DNA-damage response. Despite its involvement in various diseases and its potential as a cancer drug target, no directed… read more here.

Keywords: nek1 inhibitor; kinase; guided design; structure guided ... See more keywords

Structure-Guided Design of Potent Spirocyclic Inhibitors of Severe Acute Respiratory Syndrome Coronavirus-2 3C-like Protease

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Published in 2022 at "Journal of Medicinal Chemistry"

DOI: 10.1021/acs.jmedchem.2c00224

Abstract: The worldwide impact of the ongoing COVID-19 pandemic on public health has made imperative the discovery and development of direct-acting antivirals aimed at targeting viral and/or host targets. SARS-CoV-2 3C-like protease (3CLpro) has emerged as… read more here.

Keywords: structure; guided design; like protease; design ... See more keywords
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Structure-Guided Design of Halofuginone Derivatives as ATP-Aided Inhibitors Against Bacterial Prolyl-tRNA Synthetase.

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Published in 2022 at "Journal of medicinal chemistry"

DOI: 10.1021/acs.jmedchem.2c01496

Abstract: Aminoacyl-tRNA synthetases (aaRSs) are promising antimicrobial targets due to their essential roles in protein translation, and expanding their inhibitory mechanisms will provide new opportunities for drug discovery. We report here that halofuginone (HF), an herb-derived… read more here.

Keywords: structure; guided design; prolyl trna; atp aided ... See more keywords
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A Scan Obfuscation Guided Design-for-Security Approach for Sequential Circuits

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Published in 2020 at "IEEE Transactions on Circuits and Systems II: Express Briefs"

DOI: 10.1109/tcsii.2019.2915606

Abstract: Logic locking, a popular countermeasure against IP piracy and counterfeiting, has been a target of several attacks, especially Boolean satisfiability attacks. The state-of-the-art solutions against SAT attack struggle to meet a fundamental criterion of logic… read more here.

Keywords: sequential circuits; guided design; logic locking; obfuscation guided ... See more keywords
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Structure-guided design of a high-affinity ligand for a riboswitch.

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Published in 2019 at "RNA"

DOI: 10.1261/rna.069567.118

Abstract: We have designed structure-based ligands for the guanidine-II riboswitch that bind with enhanced affinity, exploiting the twin binding sites created by loop-loop interaction. We synthesized diguanidine species, comprising two guanidino groups covalently connected by Cn… read more here.

Keywords: affinity; design high; guided design; structure guided ... See more keywords