A pipeline for effectively developing highly polymorphic simple sequence repeats markers based on multi‐sample genomic data
Sign Up to like & getrecommendations! Published in 2022 at "Ecology and Evolution"
DOI: 10.1002/ece3.8705
Abstract: Abstract Simple sequence repeats (SSRs) are widely used genetic markers in ecology, evolution, and conservation even in the genomics era, while a general limitation to their application is the difficulty of developing polymorphic SSR markers.… read more here.
Keywords: simple sequence; highly polymorphic; sequence repeats; genomic data ... See more keywords
Development of highly polymorphic microsatellite markers for Campanula glomerata L. (Campanulaceae).
Sign Up to like & getrecommendations! Published in 2021 at "Molecular biology reports"
DOI: 10.1007/s11033-021-06839-3
Abstract: BACKGROUND Campanula glomerata L. (Campanulaceae) is a self-incompatible, insect-pollinated herb occurring in calcareous grasslands, and is declining and (critically) endangered in many parts of its European distribution range. It often exists as small and isolated… read more here.
Keywords: campanula glomerata; glomerata campanulaceae; highly polymorphic; polymorphic microsatellite ... See more keywords
Rapid sequence modification in the highly polymorphic region (HPR) of the hemagglutinin gene of the infectious salmon anaemia virus (ISAV) suggests intra-segmental template switching recombination.
Sign Up to like & getrecommendations! Published in 2020 at "Journal of fish diseases"
DOI: 10.1111/jfd.13242
Abstract: The ISAV has a genome composed of eight segments of (-)ssRNA, segment 6 codes for the hemagglutinin-esterase protein, and has the most variable region of the genome, the highly polymorphic region (HPR), which is unique… read more here.
Keywords: polymorphic region; region hpr; highly polymorphic; hpr ... See more keywords
The application of short and highly polymorphic microhaplotype loci in paternity testing and sibling testing of temperature-dependent degraded samples
Sign Up to like & getrecommendations! Published in 2022 at "Frontiers in Genetics"
DOI: 10.3389/fgene.2022.983811
Abstract: Paternity testing and sibling testing become more complex and difficult when samples degrade. But the commonly used genetic markers (STR and SNP) cannot completely solve this problem due to some disadvantages. The novel genetic marker… read more here.
Keywords: degraded samples; microhaplotype; highly polymorphic; microhaplotype loci ... See more keywords