hc-OTU: A Fast and Accurate Method for Clustering Operational Taxonomic Units Based on Homopolymer Compaction
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DOI: 10.1109/tcbb.2016.2535326
Abstract: To assess the genetic diversity of an environmental sample in metagenomics studies, the amplicon sequences of 16s rRNA genes need to be clustered into operational taxonomic units (OTUs). Many existing tools for OTU clustering trade off… read more here.
Keywords: accuracy; method; homopolymer compaction; operational taxonomic ... See more keywords