A Hybrid Assembly with Nickel Poly-pyridine Polymer on CdS QDs for Photo-reducing CO2 into Syngas with Controlled H2/CO Ratios.
Sign Up to like & getrecommendations! Published in 2022 at "ChemSusChem"
DOI: 10.1002/cssc.202200200
Abstract: A hybrid photocatalytic assembly with Ni poly-pyridine polymers binding on CdS quantum dots is developed via thiophene immobilization. The fabricated hybrid assembly fascinates efficient charge separation, and each component endows great synergy. As a result,… read more here.
Keywords: assembly nickel; syngas; hybrid assembly; poly pyridine ... See more keywords
HASLR: Fast Hybrid Assembly of Long Reads
Sign Up to like & getrecommendations! Published in 2020 at "iScience"
DOI: 10.1016/j.isci.2020.101389
Abstract: Summary Third-generation sequencing technologies from companies such as Oxford Nanopore and Pacific Biosciences have paved the way for building more contiguous and potentially gap-free assemblies. The larger effective length of their reads has provided a… read more here.
Keywords: haslr fast; hybrid assembly; assembly long; long reads ... See more keywords
Hybrid assembly and comparative genomics unveil insights into the evolution and biology of the red-legged partridge
Sign Up to like & getrecommendations! Published in 2024 at "Scientific Reports"
DOI: 10.1038/s41598-024-70018-0
Abstract: The red-legged partridge Alectoris rufa plays a crucial role in the ecosystem of southwestern Europe, and understanding its genetics is vital for conservation and management. Here we sequence, assemble, and annotate a highly contiguous and… read more here.
Keywords: red legged; biology; hybrid assembly; legged partridge ... See more keywords
On a human-robot collaboration in an assembly cell
Sign Up to like & getrecommendations! Published in 2017 at "International Journal of Computer Integrated Manufacturing"
DOI: 10.1080/0951192x.2016.1187297
Abstract: This is a study of a Human-Robot Collaboration (HRC) framework for the execution of collaborative tasks in hybrid assembly cells. Robots and humans coexist in the same cell and share tasks according to their capabilities.… read more here.
Keywords: assembly cell; robot collaboration; hybrid assembly; robot ... See more keywords
Finding Nemo: hybrid assembly with Oxford Nanopore and Illumina reads greatly improves the clownfish (Amphiprion ocellaris) genome assembly
Sign Up to like & getrecommendations! Published in 2018 at "GigaScience"
DOI: 10.1093/gigascience/gix137
Abstract: Abstract Background Some of the most widely recognized coral reef fishes are clownfish or anemonefish, members of the family Pomacentridae (subfamily: Amphiprioninae). They are popular aquarium species due to their bright colours, adaptability to captivity,… read more here.
Keywords: genome assembly; ocellaris genome; hybrid assembly; amphiprion ocellaris ... See more keywords
Completion of draft bacterial genomes by long-read sequencing of synthetic genomic pools
Sign Up to like & getrecommendations! Published in 2020 at "BMC Genomics"
DOI: 10.1186/s12864-020-06910-6
Abstract: Background Illumina technology currently dominates bacterial genomics due to its high read accuracy and low sequencing cost. However, the incompleteness of draft genomes generated by Illumina reads limits their application in comprehensive genomics analyses. Alternatively,… read more here.
Keywords: sgp hybrid; long read; hybrid assembly; bacterial genomes ... See more keywords
Benchmarking hybrid assembly approaches for genomic analyses of bacterial pathogens using Illumina and Oxford Nanopore sequencing
Sign Up to like & getrecommendations! Published in 2020 at "BMC Genomics"
DOI: 10.1186/s12864-020-07041-8
Abstract: Background We benchmarked the hybrid assembly approaches of MaSuRCA, SPAdes, and Unicycler for bacterial pathogens using Illumina and Oxford Nanopore sequencing by determining genome completeness and accuracy, antimicrobial resistance (AMR), virulence potential, multilocus sequence typing… read more here.
Keywords: quality; hybrid assembly; reference; long reads ... See more keywords
Hybrid Assembly and Annotation of the Genome of the Indian Punica granatum, a Superfood
Sign Up to like & getrecommendations! Published in 2022 at "Frontiers in Genetics"
DOI: 10.3389/fgene.2022.786825
Abstract: The wonder fruit pomegranate (Punica granatum, family Lythraceae) is one of India’s economically important fruit crops that can grow in different agro-climatic conditions ranging from tropical to temperate regions. This study reports high-quality de novo… read more here.
Keywords: hybrid assembly; annotation genome; assembly annotation; genome ... See more keywords
Hybrid Assembly Improves Genome Quality and Completeness of Trametes villosa CCMB561 and Reveals a Huge Potential for Lignocellulose Breakdown
Sign Up to like & getrecommendations! Published in 2022 at "Journal of Fungi"
DOI: 10.3390/jof8020142
Abstract: Trametes villosa is a wood-decaying fungus with great potential to be used in the bioconversion of agro-industrial residues and to obtain high-value-added products, such as biofuels. Nonetheless, the lack of high-quality genomic data hampers studies… read more here.
Keywords: hybrid assembly; trametes villosa; potential lignocellulose; quality ... See more keywords
Deciphering Escherichia coli ESBL/pAmpC Plasmids Through High-Throughput Third-Generation Sequencing and Hybrid Assembly
Sign Up to like & getrecommendations! Published in 2025 at "Pathogens"
DOI: 10.3390/pathogens14101039
Abstract: Extended-spectrum β-lactamases (ESBLs) and plasmid-mediated AmpC (pAmpC) β-lactamases represent a threat for public health. Their dissemination is often mediated by mobile genetic elements (MGEs), but plasmid identification and characterization could be hindered by sequencing limitations.… read more here.
Keywords: escherichia coli; resistance; esbl pampc; deciphering escherichia ... See more keywords