Articles with "hybrid assembly" as a keyword



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A Hybrid Assembly with Nickel Poly-pyridine Polymer on CdS QDs for Photo-reducing CO2 into Syngas with Controlled H2/CO Ratios.

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Published in 2022 at "ChemSusChem"

DOI: 10.1002/cssc.202200200

Abstract: A hybrid photocatalytic assembly with Ni poly-pyridine polymers binding on CdS quantum dots is developed via thiophene immobilization. The fabricated hybrid assembly fascinates efficient charge separation, and each component endows great synergy. As a result,… read more here.

Keywords: assembly nickel; syngas; hybrid assembly; poly pyridine ... See more keywords
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HASLR: Fast Hybrid Assembly of Long Reads

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Published in 2020 at "iScience"

DOI: 10.1016/j.isci.2020.101389

Abstract: Summary Third-generation sequencing technologies from companies such as Oxford Nanopore and Pacific Biosciences have paved the way for building more contiguous and potentially gap-free assemblies. The larger effective length of their reads has provided a… read more here.

Keywords: haslr fast; hybrid assembly; assembly long; long reads ... See more keywords
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On a human-robot collaboration in an assembly cell

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Published in 2017 at "International Journal of Computer Integrated Manufacturing"

DOI: 10.1080/0951192x.2016.1187297

Abstract: This is a study of a Human-Robot Collaboration (HRC) framework for the execution of collaborative tasks in hybrid assembly cells. Robots and humans coexist in the same cell and share tasks according to their capabilities.… read more here.

Keywords: assembly cell; robot collaboration; hybrid assembly; robot ... See more keywords
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Finding Nemo: hybrid assembly with Oxford Nanopore and Illumina reads greatly improves the clownfish (Amphiprion ocellaris) genome assembly

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Published in 2018 at "GigaScience"

DOI: 10.1093/gigascience/gix137

Abstract: Abstract Background Some of the most widely recognized coral reef fishes are clownfish or anemonefish, members of the family Pomacentridae (subfamily: Amphiprioninae). They are popular aquarium species due to their bright colours, adaptability to captivity,… read more here.

Keywords: genome assembly; ocellaris genome; hybrid assembly; amphiprion ocellaris ... See more keywords
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Completion of draft bacterial genomes by long-read sequencing of synthetic genomic pools

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Published in 2020 at "BMC Genomics"

DOI: 10.1186/s12864-020-06910-6

Abstract: Background Illumina technology currently dominates bacterial genomics due to its high read accuracy and low sequencing cost. However, the incompleteness of draft genomes generated by Illumina reads limits their application in comprehensive genomics analyses. Alternatively,… read more here.

Keywords: sgp hybrid; long read; hybrid assembly; bacterial genomes ... See more keywords
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Benchmarking hybrid assembly approaches for genomic analyses of bacterial pathogens using Illumina and Oxford Nanopore sequencing

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Published in 2020 at "BMC Genomics"

DOI: 10.1186/s12864-020-07041-8

Abstract: Background We benchmarked the hybrid assembly approaches of MaSuRCA, SPAdes, and Unicycler for bacterial pathogens using Illumina and Oxford Nanopore sequencing by determining genome completeness and accuracy, antimicrobial resistance (AMR), virulence potential, multilocus sequence typing… read more here.

Keywords: quality; hybrid assembly; reference; long reads ... See more keywords
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Hybrid Assembly and Annotation of the Genome of the Indian Punica granatum, a Superfood

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Published in 2022 at "Frontiers in Genetics"

DOI: 10.3389/fgene.2022.786825

Abstract: The wonder fruit pomegranate (Punica granatum, family Lythraceae) is one of India’s economically important fruit crops that can grow in different agro-climatic conditions ranging from tropical to temperate regions. This study reports high-quality de novo… read more here.

Keywords: hybrid assembly; annotation genome; assembly annotation; genome ... See more keywords
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Hybrid Assembly Improves Genome Quality and Completeness of Trametes villosa CCMB561 and Reveals a Huge Potential for Lignocellulose Breakdown

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Published in 2022 at "Journal of Fungi"

DOI: 10.3390/jof8020142

Abstract: Trametes villosa is a wood-decaying fungus with great potential to be used in the bioconversion of agro-industrial residues and to obtain high-value-added products, such as biofuels. Nonetheless, the lack of high-quality genomic data hampers studies… read more here.

Keywords: hybrid assembly; trametes villosa; potential lignocellulose; quality ... See more keywords