Articles with "illumina sequencing" as a keyword



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Interpatient mutational spectrum of human coronavirus‐OC43 revealed by illumina sequencing

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Published in 2017 at "Journal of Medical Virology"

DOI: 10.1002/jmv.24780

Abstract: Human coronaviruses (HCoV) are RNA viruses that cause respiratory tract infections with viral replication of limited duration. The host and viral population heterogeneity could influence clinical phenotypes. Employing long RT‐PCR with Illumina sequencing, we quantified… read more here.

Keywords: coronavirus; mutation; hcov oc43; illumina sequencing ... See more keywords
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Small RNA Library Preparation and Illumina Sequencing in Plants.

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Published in 2017 at "Methods in molecular biology"

DOI: 10.1007/978-1-4899-7708-3_15

Abstract: The discovery of small RNAs in plants and animals almost two decades ago attracted a significant interest towards epigenetic regulation of gene expression and the practical implementation of the gained knowledge in applied studies. New… read more here.

Keywords: small rna; illumina sequencing; rna library; library preparation ... See more keywords
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Increased sequencing depth does not increase captured diversity of arbuscular mycorrhizal fungi

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Published in 2017 at "Mycorrhiza"

DOI: 10.1007/s00572-017-0791-y

Abstract: The arrival of 454 sequencing represented a major breakthrough by allowing deeper sequencing of environmental samples than was possible with existing Sanger approaches. Illumina MiSeq provides a further increase in sequencing depth but shorter read… read more here.

Keywords: fungal richness; illumina sequencing; 454 sequencing; arbuscular mycorrhizal ... See more keywords
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Circular RNA Profiling by Illumina Sequencing via Template-Dependent Multiple Displacement Amplification

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Published in 2019 at "BioMed Research International"

DOI: 10.1155/2019/2756516

Abstract: Circular RNAs (circRNAs) are newly discovered incipient non-coding RNAs with potential roles in disease progression in living organisms. Significant reports, since their inception, highlight the abundance and putative functional roles of circRNAs in every organism… read more here.

Keywords: template dependent; illumina sequencing; dependent multiple; displacement amplification ... See more keywords
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Strategy and Performance Evaluation of Low-Frequency Variant Calling for SARS-CoV-2 Using Targeted Deep Illumina Sequencing

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Published in 2021 at "Frontiers in Microbiology"

DOI: 10.3389/fmicb.2021.747458

Abstract: The ongoing COVID-19 pandemic, caused by SARS-CoV-2, constitutes a tremendous global health issue. Continuous monitoring of the virus has become a cornerstone to make rational decisions on implementing societal and sanitary measures to curtail the… read more here.

Keywords: detection; illumina sequencing; variant; low frequency ... See more keywords
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Integrated SMRT and Illumina Sequencing Provide New Insights into Crocin Biosynthesis of Gardenia jasminoides

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Published in 2022 at "International Journal of Molecular Sciences"

DOI: 10.3390/ijms23116321

Abstract: Crocins are valuable bioactive components of gardenia fruit, and their biosynthesis and accumulation have attracted widespread interest. Studies have investigated the biosynthesis and accumulation of crocin based on Illumina sequencing, but there is a lack… read more here.

Keywords: biosynthesis; crocin biosynthesis; gardenia jasminoides; biosynthesis accumulation ... See more keywords