Polishing the Oxford Nanopore long-read assemblies of bacterial pathogens with Illumina short reads to improve genomic analyses.
Sign Up to like & getrecommendations! Published in 2021 at "Genomics"
DOI: 10.1016/j.ygeno.2021.03.018
Abstract: Oxford Nanopore sequencing has been widely used to achieve complete genomes of bacterial pathogens. However, the error rates of Oxford Nanopore long reads are high. Various polishing algorithms using Illumina short reads to correct the… read more here.
Keywords: illumina short; short reads; real reads; nanopore long ... See more keywords
Illumina Short-Read Sequencing of the Mitogenomes of Novel Scarites subterraneus Isolates Allows for Taxonomic Refinement of the Genus Scarites Fabricius 1775, within the Carabidae Family
Sign Up to like & getrecommendations! Published in 2022 at "Insects"
DOI: 10.3390/insects13020190
Abstract: Simple Summary Ground beetles (Carabidae) have important ecological functions and serve as food, biological pest control, and models in biological research. Although there are over 40,000 ground beetle species worldwide, only a small fraction of… read more here.
Keywords: short read; fabricius 1775; scarites subterraneus; genus ... See more keywords