Applying Machine Learning for Integration of Multi-Modal Genomics Data and Imaging Data to Quantify Heterogeneity in Tumour Tissues
Sign Up to like & getrecommendations! Published in 2021 at "Methods in molecular biology"
DOI: 10.1007/978-1-0716-0826-5_10
Abstract: With rapid advances in experimental instruments and protocols, imaging and sequencing data are being generated at an unprecedented rate contributing significantly to the current and coming big biomedical data. Meanwhile, unprecedented advances in computational infrastructure… read more here.
Keywords: imaging data; machine learning; applying machine; integration ... See more keywords
A web-based multidisciplinary team meeting visualisation system
Sign Up to like & getrecommendations! Published in 2019 at "International Journal of Computer Assisted Radiology and Surgery"
DOI: 10.1007/s11548-019-01999-x
Abstract: AbstractPurposeMultidisciplinary team meetings (MDTs) are the standard of care for safe, effective patient management in modern hospital-based clinical practice. Medical imaging data are often the central discussion points in many MDTs, and these data are… read more here.
Keywords: imaging data; team; web based; visualisation ... See more keywords
Exploring hyperspectral imaging data sets with topological data analysis.
Sign Up to like & getrecommendations! Published in 2018 at "Analytica chimica acta"
DOI: 10.1016/j.aca.2017.11.029
Abstract: Analytical chemistry is rapidly changing. Indeed we acquire always more data in order to go ever further in the exploration of complex samples. Hyperspectral imaging has not escaped this trend. It quickly became a tool… read more here.
Keywords: imaging data; data sets; data analysis; topological data ... See more keywords
Analysis pipelines for calcium imaging data
Sign Up to like & getrecommendations! Published in 2019 at "Current Opinion in Neurobiology"
DOI: 10.1016/j.conb.2018.11.004
Abstract: Calcium imaging is a popular tool among neuroscientists because of its capability to monitor in vivo large neural populations across weeks with single neuron and single spike resolution. Before any downstream analysis, the data needs… read more here.
Keywords: imaging data; data analysis; analysis; calcium imaging ... See more keywords
Find a home for every imaging data set
Sign Up to like & getrecommendations! Published in 2020 at "Nature"
DOI: 10.1038/d41586-020-00594-4
Abstract: Repositories let researchers store, share and access life‑science images — and maybe even extract new findings. Repositories let researchers store, share and access life‑science images — and maybe even extract new findings. read more here.
Keywords: imaging data; find home; every imaging; data set ... See more keywords
EEG-BIDS, an extension to the brain imaging data structure for electroencephalography
Sign Up to like & getrecommendations! Published in 2019 at "Scientific Data"
DOI: 10.1038/s41597-019-0104-8
Abstract: The Brain Imaging Data Structure (BIDS) project is a rapidly evolving effort in the human brain imaging research community to create standards allowing researchers to readily organize and share study data within and between laboratories.… read more here.
Keywords: imaging data; eeg bids; data structure; brain imaging ... See more keywords
Modeling poliovirus replication dynamics from live time-lapse single-cell imaging data
Sign Up to like & getrecommendations! Published in 2021 at "Scientific Reports"
DOI: 10.1038/s41598-021-87694-x
Abstract: Viruses experience selective pressure on the timing and order of events during infection to maximize the number of viable offspring they produce. Additionally, they may experience variability in cellular environments encountered, as individual eukaryotic cells… read more here.
Keywords: single cell; imaging data; replication dynamics; replication ... See more keywords
Enhancing studies of the connectome in autism using the autism brain imaging data exchange II
Sign Up to like & getrecommendations! Published in 2017 at "Scientific Data"
DOI: 10.1038/sdata.2017.10
Abstract: The second iteration of the Autism Brain Imaging Data Exchange (ABIDE II) aims to enhance the scope of brain connectomics research in Autism Spectrum Disorder (ASD). Consistent with the initial ABIDE effort (ABIDE I), that… read more here.
Keywords: imaging data; autism; data exchange; brain imaging ... See more keywords
Statistical Inferences for Complex Dependence of Multimodal Imaging Data*
Sign Up to like & getrecommendations! Published in 2023 at "Journal of the American Statistical Association"
DOI: 10.1080/01621459.2023.2200610
Abstract: Statistical analysis of multimodal imaging data is a challenging task, since the data involves high-dimensionality, strong spatial correlations and complex data structures. In this paper, we propose rigorous statistical testing procedures for making inferences on… read more here.
Keywords: complex dependence; multimodal imaging; inferences complex; imaging data ... See more keywords
Neural decoding on imbalanced calcium imaging data with a network of support vector machines
Sign Up to like & getrecommendations! Published in 2021 at "Advanced Robotics"
DOI: 10.1080/01691864.2020.1863259
Abstract: We present a novel neural decoding system for calcium imaging data. Miniature calcium imaging is of great utility for examining population neural activity of animals. Our neural decoding system is developed using a carefully designed… read more here.
Keywords: neural decoding; imaging data; system; support vector ... See more keywords
Integrative analysis of multi-omics and imaging data with incorporation of biological information via structural Bayesian factor analysis
Sign Up to like & getrecommendations! Published in 2023 at "Briefings in bioinformatics"
DOI: 10.1093/bib/bbad073
Abstract: MOTIVATION With the rapid development of modern technologies, massive data are available for the systematic study of Alzheimer's disease (AD). Though many existing AD studies mainly focus on single-modality omics data, multi-omics datasets can provide… read more here.
Keywords: information; multi omics; factor; analysis ... See more keywords