Deep reticulation and incomplete lineage sorting obscure the diploid phylogeny of rain-lilies and allies (Amaryllidaceae tribe Hippeastreae).
Sign Up to like & getrecommendations! Published in 2017 at "Molecular phylogenetics and evolution"
DOI: 10.1016/j.ympev.2017.04.003
Abstract: Hybridization is a frequent and important force in plant evolution. Next-generation sequencing (NGS) methods offer new possibilities for clade resolution and ambitious sampling of gene genealogies, yet difficulty remains in detecting deep reticulation events using… read more here.
Keywords: tribe hippeastreae; amaryllidaceae tribe; incomplete lineage; deep reticulation ... See more keywords
Species delimitation in the presence of strong incomplete lineage sorting and hybridization: Lessons from Ophioderma (Ophiuroidea: Echinodermata).
Sign Up to like & getrecommendations! Published in 2019 at "Molecular phylogenetics and evolution"
DOI: 10.1016/j.ympev.2018.11.014
Abstract: Accurate species delimitation is essential to properly assess biodiversity, but also for management and conservation purposes. Yet, it is not always trivial to accurately define species boundaries in closely related species due to incomplete lineage… read more here.
Keywords: incomplete lineage; strong incomplete; hybridization; species delimitation ... See more keywords
Phylogenomics and biogeography of Catalpa (Bignoniaceae) reveal incomplete lineage sorting and three dispersal events.
Sign Up to like & getrecommendations! Published in 2021 at "Molecular phylogenetics and evolution"
DOI: 10.1016/j.ympev.2021.107330
Abstract: Catalpa Scop. (Bignoniaceae) is a small genus (8 spp.) of trees that is disjunctly distributed among eastern Asia, eastern United States, and the West Indies. Catalpa bears beautiful inflorescences and have been cultivated as important… read more here.
Keywords: incomplete lineage; catalpa; dispersal events; lineage sorting ... See more keywords
Incomplete lineage sorting and local extinction shaped the complex evolutionary history of the Paleogene relict conifer genus, Chamaecyparis (Cupressaceae).
Sign Up to like & getrecommendations! Published in 2022 at "Molecular phylogenetics and evolution"
DOI: 10.1016/j.ympev.2022.107485
Abstract: Inferring accurate biogeographic history of plant taxa with an East Asia (EA)-North America (NA) is usually hindered by conflicting phylogenies and a poor fossil record. The current distribution of Chamaecyparis (false cypress; Cupressaceae) with four… read more here.
Keywords: chamaecyparis; lineage sorting; complex evolutionary; incomplete lineage ... See more keywords
Comparative phylogeography study reveals introgression and incomplete lineage sorting during rapid diversification of Rhodiola.
Sign Up to like & getrecommendations! Published in 2021 at "Annals of botany"
DOI: 10.1093/aob/mcab133
Abstract: BACKGROUND AND AIMS Many plant taxa in the Qinghai-Tibetan Plateau (QTP) and the Hengduan Mountains (HM) radiated rapidly during the Quaternary but with frequent secondary contact between diverging populations. Incomplete lineage sorting (ILS) and introgressive… read more here.
Keywords: introgressive hybridization; incomplete lineage; lineage sorting; rapid diversification ... See more keywords
Incomplete lineage sorting and introgression in the diversification of Chinese spot-billed ducks and mallards
Sign Up to like & getrecommendations! Published in 2019 at "Current Zoology"
DOI: 10.1093/cz/zoy074
Abstract: Abstract Incomplete lineage sorting and introgression are 2 major and nonexclusive causes of species-level non-monophyly. Distinguishing between these 2 processes is notoriously difficult because they can generate similar genetic signatures. Previous studies have suggested that… read more here.
Keywords: incomplete lineage; chinese spot; introgression; spot billed ... See more keywords
Divergence Estimation in the Presence of Incomplete Lineage Sorting and Migration
Sign Up to like & getrecommendations! Published in 2019 at "Systematic Biology"
DOI: 10.1093/sysbio/syy041
Abstract: &NA; This article focuses on the problem of estimating a species tree from multilocus data in the presence of incomplete lineage sorting and migration. I develop a mathematical model similar to IMa2 (Hey 2010) for… read more here.
Keywords: incomplete lineage; divergence estimation; migration; sorting migration ... See more keywords
Resolving Deep Nodes in an Ancient Radiation of Neotropical Fishes in the Presence of Conflicting Signals from Incomplete Lineage Sorting.
Sign Up to like & getrecommendations! Published in 2019 at "Systematic biology"
DOI: 10.1093/sysbio/syy085
Abstract: Resolving patterns of ancient and rapid diversifications is one of the most challenging tasks in evolutionary biology. These difficulties arise from confusing phylogenetic signals that are associated with the interplay of incomplete lineage sorting (ILS)… read more here.
Keywords: incomplete lineage; ancient radiation; biology; gene ... See more keywords
Pervasive incomplete lineage sorting illuminates speciation and selection in primates
Sign Up to like & getrecommendations! Published in 2023 at "Science"
DOI: 10.1126/science.abn4409
Abstract: Incomplete lineage sorting (ILS) causes the phylogeny of some parts of the genome to differ from the species tree. In this work, we investigate the frequencies and determinants of ILS in 29 major ancestral nodes… read more here.
Keywords: lineage sorting; speciation; incomplete lineage; population ... See more keywords