Integrated transcriptome, small RNA, and degradome analysis to elucidate the regulation of rice seedling mesocotyl development during the passage from darkness to light
Sign Up to like & getrecommendations! Published in 2020 at "Crop Journal"
DOI: 10.1016/j.cj.2020.05.002
Abstract: Abstract The mesocotyl, a structure located between the basal part of the seminal root and the coleoptile node of seedlings, contributes to pushing the shoot tip through the soil surface, a function that is essential… read more here.
Keywords: mesocotyl; rice; analysis; integrated transcriptome ... See more keywords
Integrated Transcriptome Profiling Identifies Prognostic Hub Genes as Therapeutic Targets of Glioblastoma: Evidenced by Bioinformatics Analysis
Sign Up to like & getrecommendations! Published in 2022 at "ACS Omega"
DOI: 10.1021/acsomega.2c01820
Abstract: Glioblastoma (GBM) is the most devastating and frequent type of primary brain tumor with high morbidity and mortality. Despite the use of surgical resection followed by radio- and chemotherapy as standard therapy, the progression of… read more here.
Keywords: hub genes; hub; integrated transcriptome; analysis ... See more keywords
Integrated transcriptome and metabolomics analyses revealed key functional genes in Canna indica under Cr stress
Sign Up to like & getrecommendations! Published in 2024 at "Scientific Reports"
DOI: 10.1038/s41598-024-64877-w
Abstract: Chromium (Cr) can interfere with plant gene expression, change the content of metabolites and affect plant growth. However, the molecular response mechanism of wetland plants at different time sequences under Cr stress has yet to… read more here.
Keywords: indica stress; plant; transcriptome metabolomics; stress ... See more keywords
Integrated transcriptome analysis of rats exposed to bisphenol mixtures from the fetal to developmental stage.
Sign Up to like & getrecommendations! Published in 2025 at "Toxicology research"
DOI: 10.1093/toxres/tfaf120
Abstract: Bisphenol A (BPA), widely used in plastics and resins, has raised health concerns for its endocrine-disrupting effects. BPA analogues such as bisphenol S (BPS) and bisphenol F (BPF) emerged as alternatives but exhibit similar risks.… read more here.
Keywords: stage; integrated transcriptome; transcriptome analysis; analysis rats ... See more keywords
Integrated transcriptome and proteome analysis provides new insights into camptothecin biosynthesis and regulation in Camptotheca acuminata.
Sign Up to like & getrecommendations! Published in 2023 at "Physiologia plantarum"
DOI: 10.1111/ppl.13916
Abstract: Camptotheca acuminata Decne., the main source of camptothecin (CPT), has received increasing attention for its remarkable antitumor activity. Many CPT derivatives are clinically used as effective anticancer agents worldwide. However, their biosynthesis mechanism remains unclear,… read more here.
Keywords: biosynthesis; integrated transcriptome; camptotheca acuminata; transcriptome proteome ... See more keywords
Integrated transcriptome and trajectory analysis of cutaneous T-cell lymphoma identifies putative precancer populations
Sign Up to like & getrecommendations! Published in 2022 at "Blood Advances"
DOI: 10.1182/bloodadvances.2022008168
Abstract: Key Points • Integrated transcriptome analyses identify putative precancerous circulating clonal CD4+ T-cell populations in patients with CTCL.• The study results reveal promising therapeutic strategies via targeting of CD82 and JAK kinases. read more here.
Keywords: cell; transcriptome trajectory; integrated transcriptome; trajectory analysis ... See more keywords
Integrated transcriptome and metabolome profiling reveals mechanisms underlying the infection of Cytospora mali in “Jin Hong” branches
Sign Up to like & getrecommendations! Published in 2024 at "Frontiers in Microbiology"
DOI: 10.3389/fmicb.2024.1394447
Abstract: Introduction Valsa canker, caused by Cytospora mali, is a destructive disease in apple production. However, the mechanism by which apple defend against C. mali infection remains unclear. Methods In this study, the integrative transcriptional and… read more here.
Keywords: transcriptome metabolome; jin hong; integrated transcriptome; cytospora mali ... See more keywords
Integrated transcriptome and metabolome analysis reveals the anthocyanin biosynthesis mechanisms in blueberry (Vaccinium corymbosum L.) leaves under different light qualities
Sign Up to like & getrecommendations! Published in 2022 at "Frontiers in Plant Science"
DOI: 10.3389/fpls.2022.1073332
Abstract: Introduction Blueberry (Vaccinium corymbosum L.) is a popular fruit with an abundance of anthocyanins in its leaves and fruits. Light is one of the pivotal environmental elements that affects plant growth and development, but the… read more here.
Keywords: biosynthesis; integrated transcriptome; blueberry; blue light ... See more keywords
Integrated Transcriptome and Metabolome Analysis Reveals Key Metabolites Involved in Camellia oleifera Defense against Anthracnose
Sign Up to like & getrecommendations! Published in 2022 at "International Journal of Molecular Sciences"
DOI: 10.3390/ijms23010536
Abstract: Camellia oleifera (Ca. oleifera) is a woody tree species cultivated for the production of edible oil from its seed. The growth and yield of tea-oil trees are severely affected by anthracnose (caused by Colletotrichum gloeosporioides).… read more here.
Keywords: flavonoid biosynthesis; biosynthesis; integrated transcriptome; analysis ... See more keywords
Integrated Transcriptome and Untargeted Metabolomic Analyses Revealed the Role of Methyltransferase Lae1 in the Regulation of Phospholipid Metabolism in Trichoderma atroviride
Sign Up to like & getrecommendations! Published in 2023 at "Journal of Fungi"
DOI: 10.3390/jof9010120
Abstract: The putative methyltransferase Lae1 is a global regulator in Trichoderma, which modulates the expression of secondary metabolite gene clusters, possibly via chromatin remodeling. Here we aimed to explore the specific transcription and metabolites profiles regulated… read more here.
Keywords: metabolism; integrated transcriptome; phospholipid metabolism; regulation ... See more keywords