Articles with "integrated transcriptomic" as a keyword



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Integrated transcriptomic and metabolomic analysis of Rhizopus oryzae with different morphologies

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Published in 2018 at "Process Biochemistry"

DOI: 10.1016/j.procbio.2017.10.001

Abstract: In trying to discover the potential genes or strategies used to regulate the morphology of Rhizopus oryzae, cells in different morphological states were subjected to transcriptomic and metabolomic analyses. The results showed that the tricarboxylic… read more here.

Keywords: transcriptomic metabolomic; integrated transcriptomic; analysis rhizopus; rhizopus oryzae ... See more keywords

Integrated Transcriptomic and Metabolomic Analyses Reveal the Molecular and Metabolic Basis of Flavonoids in Areca catechu L.

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Published in 2023 at "Journal of agricultural and food chemistry"

DOI: 10.1021/acs.jafc.2c08864

Abstract: Areca catechu L., of the Arecaceae family, is widely distributed in tropical Asia. In A. catechu, the extracts and compounds, including flavonoids, have various pharmacological activities. Although there are many studies of flavonoids, the molecular… read more here.

Keywords: areca catechu; transcriptomic metabolomic; analyses reveal; integrated transcriptomic ... See more keywords

Integrated Transcriptomic and Metabolomic Analysis Reveals the Role of SlOSCA8 in Enhancing Cold Tolerance in Tomato (Solanum lycopersicum).

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Published in 2025 at "Journal of agricultural and food chemistry"

DOI: 10.1021/acs.jafc.5c03391

Abstract: In recent years, increasing frequency of extreme weather events has caused serious damage to the growth and development of tomatoes. SlOSCA8, a hyperosmolality-gated calcium channel protein, plays a crucial role in regulating plant stress responses.… read more here.

Keywords: tomato; integrated transcriptomic; role; tolerance ... See more keywords

Integrated transcriptomic–genomic tool Texomer profiles cancer tissues

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Published in 2019 at "Nature Methods"

DOI: 10.1038/s41592-019-0388-9

Abstract: Profiling of both the genome and the transcriptome promises a comprehensive, functional readout of a tissue sample, yet analytical approaches are required to translate the increased data dimensionality, heterogeneity and complexity into patient benefits. We… read more here.

Keywords: transcriptomic genomic; tool texomer; genomic tool; texomer ... See more keywords

Integrated Transcriptomic and Proteomic Analyses Reveal the Role of NprR in Bacillus anthracis Extracellular Protease Expression Regulation and Oxidative Stress Responses

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Published in 2020 at "Frontiers in Microbiology"

DOI: 10.3389/fmicb.2020.590851

Abstract: NprR is a protein of Bacillus anthracis that exhibits moonlighting functions as either a phosphatase or a neutral protease regulator that belongs to the RNPP family. We previously observed that the extracellular protease activity of… read more here.

Keywords: deletion mutant; nprr deletion; protease; integrated transcriptomic ... See more keywords

Integrated transcriptomic and metabolic analyses provide insights into the maintenance of embryogenic potential and the biosynthesis of phenolic acids and flavonoids involving transcription factors in Larix kaempferi (Lamb.) Carr.

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Published in 2022 at "Frontiers in Plant Science"

DOI: 10.3389/fpls.2022.1056930

Abstract: Somatic embryogenesis (SE) techniques have been established for micropropagation or basic research related to plant development in many conifer species. The frequent occurrence of non-embryogenic callus (NEC) during SE has impose constraints on the application… read more here.

Keywords: kaempferi lamb; biosynthesis; embryogenic potential; maintenance ... See more keywords

Integrated Transcriptomic and Metabolomic Analysis Identified Key Transcriptional Factors Involved in Flavonoid and Alkaloid Biosynthesis Among Different Tissues of Sophora flavescens

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Published in 2025 at "Agronomy"

DOI: 10.3390/agronomy15061455

Abstract: Sophora flavescens has anti-inflammatory, analgesic, antibacterial, antiviral, and anti-tumor properties due to its active compounds, including alkaloids and flavonoids. Exploring the biosynthetic regulation mechanism of these compounds is crucial. Here, we identified 227 flavonoids and… read more here.

Keywords: sophora flavescens; transcriptomic metabolomic; integrated transcriptomic; metabolomic analysis ... See more keywords
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Integrated Transcriptomic and Metabolomic Analysis of Color Changes in Maize Root Systems Treated with Methyl Jasmonate

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Published in 2025 at "Biology"

DOI: 10.3390/biology14091124

Abstract: Simple Summary Maize roots are vulnerable to environmental stress, impacting yield. Anthocyanins, crucial antioxidants aiding stress resistance, can be induced by the plant hormone JA, but its role in maize remains poorly characterized. This study… read more here.

Keywords: transcriptomic metabolomic; integrated transcriptomic; metabolomic analysis; changes maize ... See more keywords

Integrated Transcriptomic and Metabolomics Analysis of the Root Responses of Orchardgrass to Submergence Stress

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Published in 2023 at "International Journal of Molecular Sciences"

DOI: 10.3390/ijms24032089

Abstract: Submergence stress can severely affect plant growth. Orchardgrass (Dactylis glomerata L.) is an important forage grass, and the molecular mechanisms of orchardgrass to submergence stress are not well understood. The roots of the flood-tolerant cultivar… read more here.

Keywords: biosynthesis; orchardgrass submergence; submergence stress; integrated transcriptomic ... See more keywords

Integrated Transcriptomic and Metabolomic Analysis of Exogenous NAA Effects on Maize Seedling Root Systems under Potassium Deficiency

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Published in 2024 at "International Journal of Molecular Sciences"

DOI: 10.3390/ijms25063366

Abstract: Auxin plays a crucial role in regulating root growth and development, and its distribution pattern under environmental stimuli significantly influences root plasticity. Under K deficiency, the interaction between K+ transporters and auxin can modulate root… read more here.

Keywords: integrated transcriptomic; analysis; exogenous naa; root systems ... See more keywords

Integrated Transcriptomic and Metabolomic Insights into “I See You” (ISY) Defensive Behavior in Apis cerana Against Vespa velutina

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Published in 2025 at "Insects"

DOI: 10.3390/insects16101047

Abstract: Simple Summary Hornets are major predators of honey bees. When a hornet approaches the nest, guard bees of Apis cerana perform an “I See You” (ISY) display. To explore what supports this rapid, coordinated display,… read more here.

Keywords: transcriptomic metabolomic; integrated transcriptomic; apis cerana; see isy ... See more keywords