Efficient computation of co-transcriptional RNA-ligand interaction dynamics.
Sign Up to like & getrecommendations! Published in 2018 at "Methods"
DOI: 10.1016/j.ymeth.2018.04.036
Abstract: Riboswitches form an abundant class of cis-regulatory RNA elements that mediate gene expression by binding a small metabolite. For synthetic biology applications, they are becoming cheap and accessible systems for selectively triggering transcription or translation… read more here.
Keywords: ligand interaction; rna ligand; interaction dynamics; transcriptional rna ... See more keywords
Magnetic Monitoring of Single-DNA Interaction Dynamics at Interfaces Using Diamond Quantum Sensors.
Sign Up to like & getrecommendations! Published in 2025 at "Nano letters"
DOI: 10.1021/acs.nanolett.5c03522
Abstract: Elucidating mechanisms of biomolecular interactions at interfaces is critical for understanding numerous physiological processes and optimizing various biomedical analysis technologies. However, inadequate sensitivity, stability, and specificity of existing detection techniques hinder interfacial biomolecular interaction studies,… read more here.
Keywords: interaction dynamics; single dna; monitoring single; interaction ... See more keywords
A tool to simulate and visualize dyadic interaction dynamics.
Sign Up to like & getrecommendations! Published in 2023 at "Psychological methods"
DOI: 10.1037/met0000575
Abstract: ynamic models are becoming increasingly popular to study the dynamic processes of dyadic interactions. In this article, we present a Dyadic Interaction Dynamics (DID) Shiny app which provides simulations and visualizations of data from several… read more here.
Keywords: tool simulate; model; var model; interaction dynamics ... See more keywords
Interaction dynamics and virus-host range for estuarine actinophages captured by epicPCR.
Sign Up to like & getrecommendations! Published in 2021 at "Nature microbiology"
DOI: 10.1038/s41564-021-00873-4
Abstract: Viruses impact microbial diversity, gene flow and function through virus-host interactions. Although metagenomics surveys are rapidly cataloguing viral diversity, methods are needed to capture specific virus-host interactions in situ. Here, we leveraged metagenomics and repurposed… read more here.
Keywords: virus host; host; interaction dynamics; host interactions ... See more keywords
Protein-RNA interaction dynamics reveal key regulators of oncogenic KRAS-driven cancers
Sign Up to like & getrecommendations! Published in 2024 at "Scientific Reports"
DOI: 10.1038/s41598-024-78333-2
Abstract: KRAS is one of the most frequently mutated oncogenes across various cancers. Oncogenic KRAS mutations rewire cellular signaling, leading to significant alterations in gene expression. RNA-binding proteins (RBPs) play a pivotal role in gene expression… read more here.
Keywords: oncogenic kras; interaction dynamics; rna interaction; kras mutant ... See more keywords
Optimal inference of molecular interaction dynamics in FRET microscopy.
Sign Up to like & getrecommendations! Published in 2023 at "Proceedings of the National Academy of Sciences of the United States of America"
DOI: 10.1073/pnas.2211807120
Abstract: Intensity-based time-lapse fluorescence resonance energy transfer (FRET) microscopy has been a major tool for investigating cellular processes, converting otherwise unobservable molecular interactions into fluorescence time series. However, inferring the molecular interaction dynamics from the observables… read more here.
Keywords: time; fret microscopy; molecular interaction; microscopy ... See more keywords
The influence of social interaction on the dynamics of employees’ psychological contracting in digitally transforming organizations
Sign Up to like & getrecommendations! Published in 2019 at "European Journal of Work and Organizational Psychology"
DOI: 10.1080/1359432x.2019.1656284
Abstract: ABSTRACT This paper takes a process perspective in exploring the influence of social interaction on the dynamics of psychological contracting throughout organizational change. Although social interaction is a key focus in social exchange theory, this… read more here.
Keywords: social interaction; psychological contracting; influence social; psychological contract ... See more keywords
Fast interaction dynamics of G-quadruplex and RGG-rich peptides unveiled in zero-mode waveguides
Sign Up to like & getrecommendations! Published in 2021 at "Nucleic Acids Research"
DOI: 10.1093/nar/gkab1002
Abstract: Abstract G-quadruplexes (GQs), a non-canonical form of DNA, are receiving a huge interest as target sites for potential applications in antiviral and anticancer drug treatments. The biological functions of GQs can be controlled by specifically… read more here.
Keywords: rgg; zero mode; interaction; interaction dynamics ... See more keywords
Interaction dynamics of optical dark bound solitons for a defocusing Lakshmanan-Porsezian-Daniel equation.
Sign Up to like & getrecommendations! Published in 2022 at "Optics express"
DOI: 10.1364/oe.473024
Abstract: We investigate the propagation and interaction dynamics of the optical dark bound solitons for the defocusing Lakshmanan-Porsezian-Daniel equation, which is a physically relevant generalization of the nonlinear Schrödinger equation involving the higher-order effects. Explicit N-dark… read more here.
Keywords: interaction; equation; dark solitons; bound ... See more keywords
Coordination of Speaking Opportunities in Virtual Reality: Analyzing Interaction Dynamics and Context-Aware Strategies
Sign Up to like & getrecommendations! Published in 2024 at "Applied Sciences"
DOI: 10.3390/app142412071
Abstract: This study explores the factors influencing turn-taking coordination in virtual reality (VR) environments, with a focus on identifying key interaction dynamics that affect the ease of gaining speaking opportunities. By analyzing VR interaction data through… read more here.
Keywords: interaction dynamics; virtual reality; turn taking; interaction ... See more keywords
Low-Resolution Models for the Interaction Dynamics of Coated Gold Nanoparticles with β2-microglobulin
Sign Up to like & getrecommendations! Published in 2019 at "International Journal of Molecular Sciences"
DOI: 10.3390/ijms20163866
Abstract: A large number of low-resolution models have been proposed in the last decades to reduce the computational cost of molecular dynamics simulations for bio-nano systems, such as those involving the interactions of proteins with functionalized… read more here.
Keywords: resolution; resolution models; interaction dynamics; dynamics coated ... See more keywords