Articles with "internal transcribed" as a keyword



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Molecular evolution of the internal transcribed spacers in red oaks (Quercus sect. Lobatae)

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Published in 2019 at "Computational biology and chemistry"

DOI: 10.1016/j.compbiolchem.2019.107117

Abstract: Previous studies of the Internal Transcribed Spacers of the nuclear ribosomal DNA (ITS) in sections Quercus (white oaks), Protobalanus (intermediate or golden cup oaks), Cerris (Cerris oaks), and Ilex (Ilex oaks) suggest that ITS regions… read more here.

Keywords: red oaks; three ribotypes; internal transcribed; evolution ... See more keywords

Internal transcribed spacer-based CAPS marker development for Lilium hansonii identification from wild Lilium native to Korea

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Published in 2018 at "Scientia Horticulturae"

DOI: 10.1016/j.scienta.2018.03.013

Abstract: Abstract We have developed a cleaved amplified polymorphic sequence (CAPS) marker with the aim of identifying the best species among the different wild Lilium species native to Korea for breeding purpose. The CAPS marker is… read more here.

Keywords: internal transcribed; caps marker; lilium species; wild lilium ... See more keywords
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Evolution of ribosomal internal transcribed spacers in Deuterostomia.

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Published in 2017 at "Molecular phylogenetics and evolution"

DOI: 10.1016/j.ympev.2017.08.015

Abstract: Sequences of ribosomal internal transcribed spacers (ITSs) are of great importance to molecular phylogenetics and DNA barcoding, but remain unstudied in some large taxa of Deuterostomia. We have analyzed complete ITS1 and ITS2 sequences in… read more here.

Keywords: ribosomal internal; internal transcribed; evolution; transcribed spacers ... See more keywords

Metataxonomics of Internal Transcribed Spacer amplicons in cerebrospinal fluid for diagnosing and genotyping of cryptococcal meningitis

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Published in 2019 at "Chinese Medical Journal"

DOI: 10.1097/cm9.0000000000000541

Abstract: Supplemental Digital Content is available in the text read more here.

Keywords: cerebrospinal fluid; metataxonomics internal; spacer amplicons; internal transcribed ... See more keywords

Mucormycosis-causing fungi in humans: a meta-analysis establishing the phylogenetic relationships using internal transcribed spacer (ITS) sequences.

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Published in 2023 at "Journal of medical microbiology"

DOI: 10.1099/jmm.0.001651

Abstract: Introduction. Mucormycosis is a severe angio-invasive fungal infection caused by mucormycetes, a group of fungi that are ubiquitous in the environment. The incidence of mucormycosis has been surging rapidly due to the global corona virus… read more here.

Keywords: meta analysis; internal transcribed; analysis; transcribed spacer ... See more keywords
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Nucleotide Sequence Database Comparison for Routine Dermatophyte Identification by Internal Transcribed Spacer 2 Genetic Region DNA Barcoding

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Published in 2018 at "Journal of Clinical Microbiology"

DOI: 10.1128/jcm.00046-18

Abstract: ABSTRACT Conventional dermatophyte identification is based on morphological features. However, recent studies have proposed to use the nucleotide sequences of the rRNA internal transcribed spacer (ITS) region as an identification barcode of all fungi, including… read more here.

Keywords: internal transcribed; dna; dermatophyte identification; identification ... See more keywords
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Phylogeny and maternal donors of Elytrigia Desv. sensu lato (Triticeae; Poaceae) inferred from nuclear internal-transcribed spacer and trnL-F sequences

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Published in 2017 at "BMC Plant Biology"

DOI: 10.1186/s12870-017-1163-7

Abstract: BackgroundElytrigia Desv. is a genus with a varied array of morphology, cytology, ecology, and distribution in Triticeae. Classification and systematic position of Elytrigia remain controversial. We used nuclear internal-transcribed spacer (nrITS) sequences and chloroplast trnL-F… read more here.

Keywords: internal transcribed; transcribed spacer; nuclear internal; biology ... See more keywords
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Molecular identification of some wild Nigerian mushrooms using internal transcribed spacer: polymerase chain reaction

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Published in 2018 at "AMB Express"

DOI: 10.1186/s13568-018-0661-9

Abstract: Identification of fungal species based on morphological characteristics is tedious, complex, prone to errors, and thus cannot be completely relied upon. In this study, internal transcribed spacers (ITS 1 and 4)—polymerase chain reaction was employed… read more here.

Keywords: identification; polymerase chain; chain reaction; internal transcribed ... See more keywords
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Optimization of the second internal transcribed spacer (ITS2) for characterizing land plants from soil

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Published in 2020 at "PLoS ONE"

DOI: 10.1371/journal.pone.0231436

Abstract: Molecular-based taxonomy, specifically DNA barcoding, has streamlined organism identification. For land plants, the recommended 2-locus barcode of rbcL and matK is not suitable for all groups, thus the second subunit of the nuclear internal transcribed… read more here.

Keywords: spacer its2; internal transcribed; transcribed spacer; land plants ... See more keywords
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Identification of the Fungal Community in Otomycosis by Internal Transcribed Spacer Sequencing

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Published in 2022 at "Frontiers in Microbiology"

DOI: 10.3389/fmicb.2022.820423

Abstract: We used internal transcribed spacer (ITS) sequencing to identify the fungal community in otomycosis patients and to evaluate the treatment effects of bifonazole. Ten patients who visited the Department of Otolaryngology of Jiangsu Provincial Hospital… read more here.

Keywords: fungal community; internal transcribed; community otomycosis; transcribed spacer ... See more keywords
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Internal transcribed spacer sequence based identification and phylogenic relationship of Herba Dendrobii

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Published in 2020 at "Journal of Food and Drug Analysis"

DOI: 10.38212/2224-6614.2051

Abstract: Herba Dendrobii, commonly known as ”Shi-hu”, has been used as a precious traditional Chinese medicine. It is expensive and adulteration arc common due to high demand. The method to distinguish the herb from adulterant species… read more here.

Keywords: dendrobium; herba dendrobii; relationship; internal transcribed ... See more keywords