Strains Colonizing Different Intestinal Sites within an Individual Are Derived from a Single Founder Population
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DOI: 10.1128/mbio.03456-22
Abstract: By reconstructing bacterial genomes from samples taken from specific sites within the human intestines, via aspiration, we show that strains at specific intestinal sites are genetically distinct yet interrelated and are derived from a single… read more here.
Keywords: sites within; intestinal sites; single founder; derived single ... See more keywords
Intraintestinal Analysis of the Functional Activity of Microbiomes and Its Application to the Common Marmoset Intestine
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DOI: 10.1128/msystems.00520-22
Abstract: We developed an analysis method that integrates metagenomes and metatranscriptomes from multiple intestinal sites to elucidate how microbial function varies along the intestinal tract. This method enables spatial covariation analysis of the functional activity of… read more here.
Keywords: intestinal sites; functional activity; analysis; activity microbiomes ... See more keywords